Pseudomonas inefficax: RIN61_17415
Help
Entry
RIN61_17415 CDS
T09811
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00300
Lysine biosynthesis
pix01100
Metabolic pathways
pix01120
Microbial metabolism in diverse environments
pix01230
Biosynthesis of amino acids
Module
pix_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RIN61_17415 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pix01002
]
RIN61_17415 (dapE)
Enzymes [BR:
pix01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RIN61_17415 (dapE)
Peptidases and inhibitors [BR:
pix01002
]
Metallo peptidases
Family M20
RIN61_17415 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Glyco_transf_20
Motif
Other DBs
NCBI-ProteinID:
WNN37987
LinkDB
All DBs
Position
complement(3863482..3864633)
Genome browser
AA seq
383 aa
AA seq
DB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWATH
GNQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGDLTALFNFRFSTESTVEGLQARVSAILDKHELDWSIDWALSGLP
FLTEPGELLDAVSASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgccgagctctcgcccaccctacaactggcctgcgacctgatccgtcgc
ccctcggtcacccccgtcgacgctgactgccaggcgcagatgatgaatcgcctgggcgcc
gtgggcttccagctggaaccgatgcgtatcgaggacgtcgacaacttctgggccactcac
ggcaaccaggacggcccggtgctgtgcttcgccggccacaccgatgtggtacccaccggc
ccggtacagcaatggcagcatgagccgttcgaagcgctgatcgacgccgatggcatgctc
tgcggccgtggcgccgccgacatgaaaggcagcctggcctccatggtgattgccagcgag
cgcttcgtgcaggactacccgaaccaccgcggcaaggtcgcgttcctgatcaccagcgac
gaggaaggcccggcccaccatggcaccaaggccgtggtcgagcgcctgaaagcacgcaac
gagcgcctggactggtgcatcgttggcgagccctccagcaccaccttgctgggtgacgtg
gtcaagaacggccgccgtggctcgttgggcgccaagctcacagtgcgcggcaagcagggc
catgtggcctacccgcacctggcacgcaacccgatccacctggccgcaccggccctggca
gaactggcggcggagcactgggacgaaggcaatgcgttcttcccgccgaccagcttccag
atctccaacctcaactccggcaccggtgccaccaatgtggtcccgggcgacctgaccgca
ctgttcaacttccgcttctccaccgagtcgactgtcgaaggcctgcaggcgcgggtatcg
gcaatcctcgacaagcacgagctggactggtcgatcgactgggcgctgtcgggcctgccg
ttccttaccgaaccgggcgaattgctggacgccgtttcggccagcatcaagggcgtcacc
ggtcgcgacacccagccgtcgaccagcggcggtacctccgatggccgcttcatcgccacc
atgggtacccaggtggtcgaactcggcccggtcaacgccaccatccaccaggtggatgag
cggatcctggccagcgacctcgacctgctgaccgaaatttattaccagaccctggtccgg
ttgctcgcctga
DBGET
integrated database retrieval system
