Pseudomonas inefficax: RIN61_17615
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Entry
RIN61_17615 CDS
T09811
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pix03016
]
RIN61_17615 (truD)
Enzymes [BR:
pix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RIN61_17615 (truD)
Transfer RNA biogenesis [BR:
pix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RIN61_17615 (truD)
Prokaryotic type
RIN61_17615 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WNN38026
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All DBs
Position
3909579..3910637
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRTISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLEQLKQHGVPNYFGTQRFGHGGGNVHDALDW
AARKALPEQRNVRSRLLSAGRSYLFNQVLAARVADGSWARAQVGDLLAFTTSRSFFPAGE
SECSDPRLAILDLHPTGPLWGAGDSPATGSSAQQEDAIAARQPALCQWLALAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctgggcccgcgcgcatcgggcgaaccgctgggtaccgccgtc
ctcaaggcggtggccgaagatttccaggtcgacgaagtactggacatcccgctgtcgggc
cagggcgagcacctgtggctttgggtcgagaagcgtgacctgaacaccgaggaggcggcc
cgccgcctggcccgtgccgctggggtgccggtgcgcacgatcagctacgccggcctcaag
gaccgccaggccctgacccgccagtggttcagcctgcacctgccaggcaaggccgacccg
gacctgtcacgtgccgaggatgccagcctgcgtgtgctcaagcaggtgcgccaccagcgc
aagctgcagcgtggcgcgcattcggccaacggcttcaccttgcgcctgactgccctggct
gccgatcaccaggcggtggatgcgcgcctggaacagctcaagcagcacggcgtgccgaat
tatttcggcactcagcgcttcggtcacggtggcggcaacgttcacgacgccctcgattgg
gccgcacgcaaggccttgcccgaacagcgcaacgtgcgttcgcggttgctctcggccggg
cgcagctacctgttcaaccaggtgctggccgcccgtgttgccgacggtagctgggcgcgt
gcccaggtgggcgacctgttggcgttcaccaccagtcgtagcttctttcctgctggggag
tcggaatgttccgatcctcggctggcgatccttgacttgcatccgaccggcccgctgtgg
ggagcaggcgattcgccggctacgggaagttctgcgcaacaagaggatgcgatcgccgca
cggcagccggcactttgccagtggctggccttggcgggcatggatcacgaacgacgtatt
ctgcggctccctattggcggtcttacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaagtcgtggatctg
gtgtcggcggggcagacggacagctcatgcgtattctga
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