Pseudomonas inefficax: RIN61_18135
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Entry
RIN61_18135 CDS
T09811
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN61_18135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_18135
Transporters [BR:
pix02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIN61_18135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
nSTAND1
AAA_16
AAA_22
AAA_25
ABC_ATPase
RsgA_GTPase
AAA_29
AAA
AAA_23
NACHT
nSTAND3
AAA_5
Rad17
ORC-CDC6-like
ATPase_2
Mg_chelatase
NB-ARC
nSTAND_NTPase5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WNN38120
LinkDB
All DBs
Position
complement(4012318..4013307)
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AA seq
329 aa
AA seq
DB search
MSFVSVQKLQKSYAGSPVFENIDCRIERGEFVTLLGPSGCGKSTLLRCIAGLTPVDSGQI
LLDGHDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVKADESQARVREALEL
VELGNFAGRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRAIQ
RELGLTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDLFAAGFIGNYNLL
DADSASRLLQRPVASRLAIRPESITLGINGELDAEVRSHSLLGNVIRYKVRVREVELVVD
VLNRSPSDLHADGQRVSLSIDPTALREVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtcagcgtacagaaactgcaaaaaagctacgccggcagcccggtgttcgaa
aacatcgactgccgtatcgaacgcggcgagttcgttaccctgctcggcccttccggttgc
ggcaagtccacgctgctgcgctgcatcgccgggctgaccccggtggacagcgggcagatc
ctgctcgacggccatgacatcgtgccgctgagcccgcaaaagcgtggcatcggcatggtg
ttccagagctatgcgctgttccccaacatgaccgtggagcagaacgtggcctttggcctg
cgcatgcagaaggtcaaagccgacgagagccaggcccgggtgcgcgaggcgctggagctg
gtggaactgggcaacttcgccgggcgctacccgcaccagttgtccggcggccagtgccag
cgcgtggccctggcccgctcgctggtcacccgcccgcgtttgctgctgctcgacgagcca
ctgtcggcactggatgcgcgcatccgcaagcacctgcgcgagcagatccgcgccattcag
cgcgagctggggctgaccaccatcttcgtcacccacgaccaggaagaggcgctgaccatg
tccgaccgcatcttcctgatgaaccaggggcgcatcgtccagagcggcgacgccgaaacc
ctctacaccgcgccggtggacctgtttgccgccggcttcatcggcaactacaacctgctc
gacgccgacagtgccagccgactgctgcagcgcccggtggccagccgcctggcgatccgc
cccgagtcgatcaccctgggcatcaacggcgaactggacgccgaagtgcgcagccacagc
ctgctgggcaatgtgatccgctacaaggtgcgggtgcgcgaggtggaactggtggtcgac
gtgctcaaccgctcaccgtccgacctgcatgcggacgggcaacgggtaagcttgtcgatc
gaccccacggcgctacgggaagtggcctaa
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