Pseudomonas inefficax: RIN61_18870
Help
Entry
RIN61_18870 CDS
T09811
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pix
Pseudomonas inefficax
Pathway
pix02020
Two-component system
pix02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RIN61_18870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
RIN61_18870
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pix01001
]
RIN61_18870
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pix02022
]
RIN61_18870
Enzymes [BR:
pix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RIN61_18870
Protein kinases [BR:
pix01001
]
Histidine kinases
Other
RIN61_18870
Two-component system [BR:
pix02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
RIN61_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
PDE8A_N
DUF4164
SIMPL
Motif
Other DBs
NCBI-ProteinID:
WNN38258
LinkDB
All DBs
Position
complement(4171425..4173782)
Genome browser
AA seq
785 aa
AA seq
DB search
MLAQRKGRETGSGHMDIKFTNRLSYKQARLTVLVGFILGTLLSLIQIGIDYASEDASINR
EVRALLQISHNPASRIAYNIDSELALELTRGLLQSPAIVRARLIDNNETVLADVERPRLE
DRYRPLSDFLFGEQRQFRERLYLTHMPEEYLGTLYLEVDTYAFGSRFLDRAGITLLNGFA
RSLVLTGILLALFYMMLTKPLVTVIGALSGSDPRKPRQTRVACPHGHEHDEIGVLVRVAN
QQFVSMATEIEQRRTAENRLTQYLNELEDIVSARTNELKASNSSLSLSNQELEEARRRAL
DMAQARAAFLANMSHEIRTPLNGMLGMIALALDSPLPSEQRQQLAIAHDSGKVLVELLND
ILDLSKFDAGQLELERIPFDMGSMVEDTANLLSQNTAQSVELTCLIARDFPSSVLGDPTR
VRQIVSNLLSNALKFTRFGRVDVRLTTIVGGVRLEVRDTGIGIPEEAQARIFQPFTQAGA
GITRQYGGTGLGLALTRNLCKAMQGHLHIKSDPGFGSRFTAELPLPVHTEAIPPAPLHGH
VAALNAAGSGLDELLQDLLPAWGLAYQRHDSSAGLDASAIDLLITDSLDQLFELRPALKT
PILLVTAYGNFLPSEQSVALAPLHQLARPLSRNALYQTLRRTLQGHEPEHPLATPAITLE
QGRARILLVEDNPVNQLVAKGMLAKLGCQVQLATQGAEALELLEQDEFDLVLMDCNMPVM
DGYEASRRIRQSGRWPDLPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHW
VPVNG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgcagcgcaagggacgtgaaaccggctcgggacacatggatatcaagttcacc
aatcgcctgtcatacaagcaagcccggttgacagtcctggtcggcttcatcctgggaaca
ttgctcagtctcatccagatcggcatcgattatgccagcgaagacgcgtccatcaaccgt
gaagtgcgtgccttgctgcaaatcagccacaacccggcctcgcgcatcgcctacaacatc
gactcggaactggccctggagctgacccgcggcctgctgcagtcaccagcgatcgtccgt
gcgcggctgatcgataacaacgaaacagtgctggccgacgtcgaacggccgcgcctggag
gaccgctaccggccgctcagcgacttcctgttcggcgagcagcgccagttcagggaacgc
ctgtacctgacccacatgcccgaggaataccttggcaccctgtacctggaggtagacacc
tatgccttcggcagccgctttctcgaccgtgccggcatcaccctgctcaacggtttcgcc
cgcagcctggtgctgaccggcatcctcctggcgctgttctacatgatgctgaccaagccg
ctggtgacggtgatcggcgcgctcagtggcagtgacccgcgcaagccccggcaaacccgc
gtggcctgcccgcatggccacgaacacgacgagatcggcgtactggtgagggtcgccaac
cagcagtttgtcagcatggccaccgagatcgagcagcggcgcaccgcagaaaaccgcctg
acccagtacctcaacgagctggaagatatcgtctcggcacgcaccaacgaactgaaggcc
agcaacagcagcctgagcctgtccaaccaggagctggaagaagcccgccgccgggcgctg
gacatggcccaggcgcgcgccgccttcctcgccaacatgagccacgaaatccgtaccccg
ctcaacggcatgctcggcatgatcgcccttgccctggacagcccgctgcccagcgagcaa
cgccaacagctggcgattgcccatgactcgggcaaggtgctggtggagttgctcaacgat
attctcgacctgtccaagttcgatgccggccagctggagcttgaacgcattccgttcgac
atgggctcgatggtcgaggacaccgccaacctgctgtcacagaacaccgcgcaaagcgtg
gagctgacctgcctgatcgcccgcgacttccccagcagcgtgcttggcgaccccacacgg
gtacggcaaatcgtcagcaacctgctgtccaatgccctcaagttcacccgcttcggccgc
gtggatgtacggctgacgaccattgtcggcggtgtgcgcctggaagtgcgcgacaccggc
atcggcatccccgaagaagcccaggcgcggatcttccagccgttcacccaggccggtgcc
ggcattacccgccagtacggcggtaccggcctgggcctggcgctgacgcgcaacctgtgc
aaggccatgcagggccacctgcatatcaagtccgacccgggcttcggcagccgcttcacc
gccgagctaccgctgcccgtgcacaccgaggccatcccgccagcaccgttgcacgggcat
gtggctgcgctgaacgcagccggcagcgggctcgatgaactgttgcaggacctgctgccc
gcctggggccttgcctaccagcgccatgacagcagcgcggggctggacgcctcggccatc
gacctgctgatcaccgacagcctggaccaactgttcgaactgcgcccggcgctgaagaca
ccgatcttgctggtgactgcctacggcaacttcctgcccagcgaacagtcggtcgccctc
gcccccctgcaccaactggcccggccgctgtcgcgcaacgccctgtaccagaccctgcgc
cgcaccttgcagggccacgagcccgaacacccgctggccacccctgccatcaccctggag
caaggccgcgcgcgcatcctgctggtggaggacaacccggtgaaccagctggtggcaaag
ggcatgctggccaagctcggctgccaggtgcagctggccacccagggcgccgaggccctg
gagctactggaacaggacgagttcgacctggtgctgatggactgcaacatgccggtgatg
gacggctacgaggccagccggcgcatccgccagagcggccgctggcccgacctgccgatc
gtcgctctcaccgccaacgccatgcccgaagaacgcgagcgctgccgggcagcgggcatg
aacgactacctggccaaaccgttccgccgcgaagagctgctggcactggtcgaccactgg
gtacccgtcaacggctga
DBGET
integrated database retrieval system
