Pseudomonas inefficax: RIN61_20270
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Entry
RIN61_20270 CDS
T09811
Name
(GenBank) AraC family transcriptional regulator
KO
K13652
AraC family transcriptional regulator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_20270
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RIN61_20270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
VHP
Motif
Other DBs
NCBI-ProteinID:
WNN38515
LinkDB
All DBs
Position
complement(4477493..4478362)
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AA seq
289 aa
AA seq
DB search
MTDSQHNPTYAKRFEAVLAYIDSHLEGDLSVTALSRVAHFSAFHFHRQFTAYIGVPVSRY
VQLMRLRRAAHQLVASPAISVLEAALGAGFESPEAFSRAFKRAFGMAPSVFAKAPNWQAW
SAVFIVPHHSRSITMQIRIVDFAETHVAALEHQGAPSLISESVARFRQWRIQSGQSPVAS
SRTFGIPHDNPDTTPAHAFRFAVCGEIDEAVQPNDFGVHERIIPAGRCAVLRHTGSPDYI
GETIYPVYRDWLPSSNEELRDHPLFFHYLSVYPETPLEQWQTDIYVPLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttgactgactcacagcacaacccaacctacgcaaaacggttcgaagccgtgcttgcctac
atcgacagccacctcgaaggtgacctgtcggtaactgccctgagccgcgtcgcccacttc
tcggcatttcatttccatcggcagttcacggcatacatcggcgttccggtttcacggtat
gtgcaactgatgaggcttcgacgcgcggcgcatcaactggtcgcctcgcctgccatctcg
gtgctggaagcagctctcggcgccggcttcgaaagccccgaagccttttccagggccttc
aagcgtgcttttggcatggcgccgagcgtattcgccaaggccccgaactggcaggcctgg
agtgcggttttcattgttccccatcattccaggagcatcaccatgcagatccgtatcgtg
gatttcgccgaaactcatgtagccgcgctcgaacaccaaggggcgcccagcctcatcagt
gaaagcgttgcgcgttttcgccaatggcgcattcaaagcggtcagtcaccggtggccagc
agccgaaccttcggcattccccacgacaaccccgataccaccccggcgcacgcctttcgc
ttcgccgtgtgtggcgagatagacgaagccgtgcagccgaatgattttggcgtgcacgaa
cgcatcatcccggcgggccgctgcgccgtactccggcataccgggtcgcctgactacatt
ggtgaaaccatctatccggtttatcgggactggttgccttcgagtaacgaggaactgcgt
gaccatccgttgttctttcactatttgagcgtgtatccggaaacgccgctggagcaatgg
caaacggatatctacgtgccgctcaagtaa
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