Pseudomonas inefficax: RIN61_20320
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Entry
RIN61_20320 CDS
T09811
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00630
Glyoxylate and dicarboxylate metabolism
pix00680
Methane metabolism
pix01100
Metabolic pathways
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIN61_20320 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RIN61_20320 (fdhF)
Enzymes [BR:
pix01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RIN61_20320 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_18
Fer4_2
Fer4_16
Fer4_17
Fer4_6
Fer4_8
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
WNN38525
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All DBs
Position
4489249..4492131
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AA seq
960 aa
AA seq
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MINFFDPASDKSSDLGTPARDSEVQVSLSIDGRAVTVPAGTSVMRAAAMLGTSIPKLCAT
DSLEAFGSCRMCMVEIEGMRGYPASCTTPVSEGMVVHTETPRLAGLRRNVMELYISDHPL
DCLTCSANGNCELQTVAGQVGLREVRYGYDGANHLAEKKDVSNPYFDYEPSKCIVCSRCV
RACEDIQGTFALTITGRGFESRVAAAGGENFLASECVSCGACVQACPTATLTEKSLVQLG
QPERAVITTCAYCGVGCSFRAEMKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDR
ITKPMIRKRLEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQK
LVRTAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHP
VFGSQLKRRLRQGARLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALAHVIVTEG
LLAQRFIDARCETEDFARWRDFVSLAENAPEVLGPVCGVPAEQIRAAARLYATGGNAAIY
YGLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGY
RHISNEGVRAEFERAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHV
TAALLAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPLAGK
ADWEATVALANALGYPMNYRHPSEIMDEIARLTPTFHRVSYAEIDRHGSLQWPCNDAAPD
GTPTMHIDQFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAW
HDADRLEIHPTDAESRGIQDGDWVGIGSRAGQTVLRAKVSARVAPGVVYTTFHFPESGAN
VITTDNSDWATNCPEYKVTAVEVVKVFQPSQWQKRYQDFSDEQQRLLKERRIAEKAEVRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaatttcttcgaccccgcttctgataaaagcagcgacctcggcaccccggcccgt
gacagcgaggtacaggtcagcctgagcatcgatggccgtgccgtcactgtgcccgccggc
acatcggtgatgcgcgctgcagccatgctcggtaccagcatccccaaactgtgcgccacc
gacagcctcgaagccttcggctcttgccgcatgtgcatggtggaaatcgaaggcatgcgc
ggttacccggcctcctgcaccaccccggtcagcgaaggcatggtggtgcacaccgaaacc
ccgcgcctggccggtttgcgccgcaacgtgatggagctgtatatctccgaccacccgctg
gactgcctgacctgttcggccaacggcaactgcgagctgcagaccgtggccggccaggtg
ggcctgcgcgaggttcgctacggctatgacggtgccaaccacctggccgagaagaaggac
gtatccaacccgtatttcgactacgagccaagcaagtgcatcgtctgcagccgctgcgtg
cgcgcctgcgaggacatccagggcaccttcgccctgactatcaccgggcgcggcttcgaa
tcgcgcgtagcggcggcgggtggggaaaacttccttgcctcggaatgcgtgtcgtgcggc
gcctgcgtacaggcttgcccgaccgcgaccctgacggaaaagagcctggtgcagctgggc
cagcccgagcgtgcggtcatcaccacctgcgcctactgcggcgtcggctgctcgttccgt
gccgaaatgaagggcgaccagttggtgcgcatggtccccgacaagaacggcggcgccaac
cacggccacgcctgcgtcaagggccgcttcgcctggggctacgccacccacccggaccgc
atcaccaagccgatgatccgcaagcgcctggaagacccgtggcaggaagtcagctgggac
gaggcggtaacctacgccgccagcgagttccgccgcatccagctgaagtacggtcgcgat
tccatcggcggcatcacctccagccgctgcaccaacgaagaagcctacctggtgcagaaa
ctggtgcgcacggcgttcggcaacaacaacgtcgacacctgcgcacgggtatgccattcg
cccaccggctatggcctgaagcagaccctgggtgaatcggctggtacgcagagcttcgac
tcggtgatgcaggccgacgtggtgctggtgatcggcgccaaccccaccgacgcccacccg
gtattcggctcgcagctcaagcgccgcctgcgtcagggtgcgcggctgatcgtgatcgac
ccgcggcgcatcgacctggtcgattcgccgcacgcccgcgccgagctgcacctgcaactg
cgccccggcaccaacgtggccatgctcaatgccctggcccacgtgatcgtcaccgaaggc
ctgctggcccagcgcttcatcgatgcccgctgcgaaaccgaggattttgcccgctggcgc
gacttcgtcagcctggcggaaaacgcccccgaagtgcttggcccggtctgcggcgtgcct
gccgagcagatccgcgccgccgcccggctgtacgccaccggcggcaacgcggcgatctac
tacggcctgggcgtgaccgagcacagccagggcagcaccgcggtgatgggtatcgccaac
ctggccatggccaccggcaacatcggccgtgaaggggtaggggtgaacccgctgcgcggg
cagaacaacgtgcagggctcgtgcgacatgggctcgttccctcacgaactgcctggctac
cggcacatttccaacgaaggcgtgcgcgccgagttcgagcgtgcctggggcgtgaccctg
cagcccgacccgggcctgcgcatccccaacatgttcgaggcggcgctggatggcagcttc
aaggccttgtactgccagggcgaggacattgcccagagcgaccccaacacccagcacgtc
accgcagccctgctggccatggagtgcgtggtggtgcaggacatcttcctcaacgaaaca
gccaagttcgcccatgtgttcctgccgggcagctcgttcctcgaaaaagacggcaccttc
accaacgccgagcggcgcatttcgcgggtgcgcaaggtgatggagccgctggctggcaag
gctgactgggaggcgaccgtggccctggccaatgccctggggtacccgatgaactaccgc
cacccgtccgagatcatggacgagatcgcccgcctgacgcctaccttccaccgcgtcagc
tacgccgagatcgaccgccacggcagcctgcagtggccgtgtaacgacgcagcgccggat
ggcacgccgaccatgcacatcgaccagttcgtacgtggcaaggggcgcttcatgctcacc
ggctacgtgcccaccgaagagaaggtcaacaaccgctacccgctgctgctgaccaccggc
cgcatcctcagccagtacaacgtcggcgcccagacccggcgtaccggcaacgttgcctgg
catgacgccgaccgcctggaaattcacccgaccgatgccgagagccgtggcatccaggac
ggtgactgggtcggtatcggcagccgcgccgggcagacggtgctgcgcgccaaggtcagt
gcacgggtagcgccgggcgtggtgtacaccacgttccacttccccgagtcgggggccaac
gtgattaccaccgacaactccgactgggccaccaactgcccggagtacaaggtgacggcg
gtggaggtggtgaaagtgttccagccttcgcagtggcagaagcgctatcaggacttcagt
gacgagcagcagcgcttgctgaaggagcgccgtattgcggaaaaagccgaggtgcgccga
tga
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