Pseudomonas inefficax: RIN61_20450
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Entry
RIN61_20450 CDS
T09811
Name
(GenBank) NEL-type E3 ubiquitin ligase domain-containing protein
Organism
pix
Pseudomonas inefficax
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
CTP_transf_like
Motif
Other DBs
NCBI-ProteinID:
WNN38550
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All DBs
Position
4519762..4524318
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AA seq
1518 aa
AA seq
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MVMALQPDRALPMCPAKALRASSYPGNGFIASHLPEWLAKASAQQVRRLHDCVTAHLQSQ
KQMARYSGQLQPLGEFAKGLLQPAIASRLGQVIELDTAVWREARIHVSQRPFEPIPGLLP
PDFETRFVQQPLLQKLLQNFTAGESFANQTAVLGPQAAGQQAPVILTDRIDDLVAVCREV
DVGAAYQAHLARVLGPAFVDALAQDKRQELALAIELACLKGQLNSADGMALSLICQDKPA
FHAEGLVVDTGALKVLGKRVDGALAFELREPIRRQSDFPVGPPDRLKGVIIYLPGAASAS
LRRFADWGAVKQALVRELAQVAFQHALLQRIALHDRAGFQALLAVRLSDAQPDLQPGRSK
TDGKWFIDMARWQARRIKNDAMFVAVPSARVDSQAAAVRLTALKNAGIGLLTLAGLFVPV
VGTLLLADMARQVLGHVYEGVSDWSQGHQHEALQHLLEVAGAVATLGVASVAAYTARSVF
VETLEPVITEQGQEKLWLSDLAPYRQADPDVEMTERHDGLFSGAGELWWHNDGKFYGVYQ
DSKGAWRLLHPDGPQAFGPLLRSNGERGWWLSLDRPQQWQGSAYLLTRLWPAARTLSAEQ
VAQILLVAGTDEAGLRRLVVESRPLPVTLRDTLERFAVHTQNQAFFDGSAEGAAFADRLN
WCSQKLGAPVDAASDQAGQLRPAMLDHFAERYLREEPLWPLFARHFPQLPKAYASDILRT
ATSEMRASMQSSSRLPLVLAQQARLQQQRARLTRLREALCLRDSYSHDAVTLVFRLLQRQ
GLAADQTDLVLHERSSSSPVLERLLPAFGKPPQRLHMVWSAGRFELYDDAGRRSDLDVAQ
PQGLFEVLAACLSPAYCRRLGWLGDDAPQRIRAQIQAWLPSEPKEQLALLGWREARPLGA
TFQRLGDGRAGYPLGPVLSCLDSPECVLRRRILALYPSLNEVQAEHYIDLLYQHSASPFS
SVLRLELEYDQLSQRLNAWARHANRHVRDHRLQASIEFQRAWRMETFRLAARPQGGRQAN
VSLISIPLGELPELPAGTDFGHIDQLVLVNLRLPALPEDFLSFFPNVQVLNLAYNDLHAL
PACLENLGQLRELNLAGNQIRLDEDQAAVLAGLGELRSLELSDNPLGAVTLQLGALHSLE
TLSLRRVGLTAMPEGLELCEQLTYVDMRNNQITDLPQALIDSPVPRRQLLILSGNPLSEQ
VMDQLRNPAHPGQPTLVELEPVVSKNTWLGTLDDNQRQAHEALWDALRIEADSDAFFGLL
DELVESADFRAAPQETGRRVWRVVAAAKGDARVRRDLFDLAADPRTCADSVAHCFSQLEV
GMHVAEFTHNGEPGATAKERLMLARRLFRLDQVEKLARANMDARYADGRWEQGEHDEEEV
EVSLAYRVGLAQRLNLLGQPTSTYFAHMVEVSPADLDAAYVSVLTAEASEERPAFISKLG
FWIKSLRALHPSLYSAVEDDFLEQWQAVEAQGQAQRSAAAALGDPGYLQQARNLQQARAR
ALAALNLRLTREALARPV
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggcccttcaaccagacagggctctgcctatgtgtcccgcaaaggcgctccgc
gcctcctcttaccctggcaatggcttcattgccagtcatttgcccgagtggcttgccaaa
gccagtgcgcaacaagtcaggcgcttgcatgactgtgtgactgcgcatttgcaaagccag
aagcagatggcccgttatagcggccagttgcaaccgcttggggaattcgcgaaaggtctg
cttcaaccagccattgcaagccggctggggcaggtgatcgagctggataccgccgtctgg
cgagaagcgcgcattcatgtcagccagcggccattcgagcccattccgggtttgcttccg
ccagacttcgaaacacgtttcgtccagcagccgttgctgcaaaaactgctgcaaaatttt
actgcaggcgagtctttcgccaaccagaccgcagtgctcgggccacaggctgcgggccag
caagcgcccgtcatattgaccgaccgaatcgatgatctggtcgccgtctgccgggaagtc
gatgtcggggccgcttaccaggcgcatcttgcccgggtactgggcccagccttcgtcgat
gcgctggcgcaagacaaacgccaggagctggcactcgccatcgagctggcctgcctgaaa
gggcagctcaacagtgccgatggcatggcgttaagcttgatttgccaagacaagccagca
ttccatgccgaggggctggtcgttgacaccggggcgttaaaggttctgggaaaacgggtc
gacggcgccctggccttcgagttgcgcgagccgatccggcggcagagcgatttcccggtg
gggccgcctgatcgtctcaaaggcgtgatcatttacctccccggcgcggcgtcagcgtcg
ttacgtcgttttgcggattggggcgctgtcaagcaagctctggtccgtgagctggcgcaa
gtggcatttcagcatgctttgctgcagcgcatcgctttgcatgatcgggcgggtttccag
gctttgttggctgtgcgcttgagtgatgcccagccagacttgcagcctggccggtcgaaa
accgatggtaagtggttcatcgatatggcccgctggcaggcgcgtcgtatcaagaacgac
gcgatgtttgtggcggttccctcggctcgcgtggatagccaagcggctgcggtgcgcctg
accgcactgaaaaacgccggcatcggtctgctgaccctggccggtttgttcgtgcctgtg
gtgggcaccttgctgttggcagacatggccaggcaagtgttggggcatgtgtacgaaggc
gtcagcgactggtcccaaggtcaccagcacgaagccttgcagcatttgctggaggtggct
ggcgcggttgcaacgcttggggtggcgtccgtggcggcctacacggcgcgtagcgttttt
gtcgagacgctcgaacccgttatcactgagcaggggcaggagaaactctggttgtccgat
ctggcgccgtatcgacaagcagaccctgatgttgagatgactgaacgccacgacgggctg
ttcagcggtgccggtgaattatggtggcacaacgatgggaaattttacggcgtgtatcag
gacagcaagggcgcgtggcgcttgctgcacccggatggcccgcaagcattcggcccgctg
ctgcgcagtaatggcgaacgcggctggtggctgagcctggaccggccacagcaatggcaa
gggagcgcgtacttgctcacacgcctgtggccggcggccagaaccctgtcagccgagcag
gtggcgcagatactgctggttgcgggcacagacgaggcggggttgcgtcggctggtggtc
gaatcccgaccgttaccggtgacgctgcgcgacaccctcgagcggttcgcggtgcatact
cagaaccaagccttttttgacggttcggctgaaggcgcggcctttgccgatcggctcaac
tggtgtagccagaaactgggtgcgccagtggatgccgcgagcgaccaggccggccaactg
cgccctgccatgctggatcattttgctgagcgatacctgcgcgaagagccgttgtggccg
ttgttcgctcgccatttcccgcaactgcccaaagcctatgcgtcggatatcctcagaacg
gccaccagcgaaatgcgagcaagcatgcagagcagttcgcgcctgccgctggtattggct
caacaggcgcggctgcagcagcagcgtgctcggctgacccgcctgcgcgaggcattgtgt
ttgcgtgacagctacagccatgatgccgttactttggtatttcgtctgttgcaacgtcag
gggctcgctgccgaccagaccgacctggtgctgcatgagcgctcgtccagcagcccggta
ctcgagcgcttgctgccggcatttggcaagccgccgcaaaggctgcacatggtctggtca
gcggggcgcttcgagctgtatgacgacgctggcaggcgcagcgacctggatgtcgcgcag
ccgcaaggcttgttcgaagtgctcgcggcctgcctttcccctgcctactgccgtcggctg
ggctggctgggtgacgatgcgccgcagcgcatccgcgcgcagatacaggcctggctgcca
tctgaacccaaggaacagctggccttgttaggctggcgtgaagccaggccgcttggcgcc
accttccagcggctcggcgatggccgcgccggctacccgctcggcccggtgctgtcgtgc
ctggactcgcctgagtgcgtgttacgccgcaggatcctcgcgctttatccgagcttgaat
gaagtgcaggccgagcattacatcgatttgctttaccagcacagcgcgtcaccgttcagc
tcggtactgcggctggagctggaatacgatcagctgtcccagcgcctcaatgcctgggcg
cggcatgccaatagacatgtgcgtgatcatcgcctgcaagccagcatcgaatttcagcgg
gcgtggcgaatggagaccttccgtttggcggcccggccgcagggcggcaggcaggcaaac
gtttctctgatctccattcctctgggcgagctgcccgaattgcccgccggcacggatttt
ggccacatcgaccagttggtgttggtcaacctgcgcctgccggcgctgcctgaggatttc
ctgtcgttcttccccaatgtgcaggtactcaaccttgcctacaacgatctgcatgcactg
cctgcctgcttggagaacctcggccagctgcgcgagctgaaccttgccggtaatcagatt
cgcctggacgaggaccaggcggcggtgctggctggcctcggcgaactgcgcagcctcgag
ctcagcgataacccgttgggcgcggtgactctgcagttgggagctctacatagcctggaa
accctgagcctgcgccgcgttggcctgacggcaatgcccgaagggctagagctttgtgaa
cagctgacctatgtcgacatgcgtaacaaccagatcaccgacctgccgcaagcactcatc
gattcaccagtgccgcggcgccagctgcttatcctgtctggcaacccattgtcggagcaa
gtgatggaccaactgcgcaaccctgcgcaccccggccagccgacgctggtcgagctggag
cccgtcgtatcgaagaacacctggctgggcacgctcgatgacaaccagcgtcaagcccat
gaagcgctgtgggatgcgctgcgcatcgaagcggacagcgatgcatttttcgggctgctc
gacgaattggtggaaagcgccgatttcagggcagcgccgcaggagaccgggcgaagggta
tggagggtggtggcagcagccaagggcgatgcccgggtgcgcagggacctgttcgacttg
gcggccgacccgcgtacttgtgccgacagcgtagcgcattgtttcagtcagttggaggtg
ggtatgcatgtggccgagttcacccacaacggtgaacccggcgcaactgccaaggaacgc
ctgatgctcgctcggcgcctgttccgcttggaccaggtcgaaaagctcgcccgcgcgaac
atggacgcaaggtatgcagatggccgctgggagcaaggtgagcacgacgaggaggaggtg
gaggtcagcctggcttatcgggtggggctggcgcagcgtctcaatctgctcggtcagccc
accagcacctattttgcgcacatggtcgaggttagcccggcagacctggacgcggcctat
gtttcggtgcttacagctgaagccagcgaggagcgacctgcattcatcagcaagctcggg
ttctggatcaagtccttgcgggcacttcatccatcgctctacagcgcggtcgaggacgac
ttcctcgaacaatggcaggctgtggaagcacaagggcaggcgcagcgcagtgctgccgcc
gcgctgggtgaccctggctatctgcagcaggcgcgaaaccttcagcaagcccgcgcacgg
gcgcttgccgcgctgaacttgcgcctgaccagagaagcgctggcgcggccggtctga
DBGET
integrated database retrieval system
