Pseudomonas inefficax: RIN61_20780
Help
Entry
RIN61_20780 CDS
T09811
Symbol
hupB
Name
(GenBank) nucleoid-associated protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pix03032
]
RIN61_20780 (hupB)
03036 Chromosome and associated proteins [BR:
pix03036
]
RIN61_20780 (hupB)
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_20780 (hupB)
DNA replication proteins [BR:
pix03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RIN61_20780 (hupB)
Chromosome and associated proteins [BR:
pix03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RIN61_20780 (hupB)
DNA repair and recombination proteins [BR:
pix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RIN61_20780 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WNN38606
LinkDB
All DBs
Position
4591689..4591961
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKQGDDVVLVGFGTFSVKERAERTG
RNPQTGKAIKIEAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgccgcatctgctgacatcccgaaagctgta
gccggccgtgcgctggacgcagtcatcgaatccgtcaccggcgccctgaagcaaggtgac
gatgtggtactggttggcttcggtaccttctcggtcaaggagcgcgcagagcgcaccggc
cgcaacccgcaaaccggcaaggcgatcaagatcgaagccgccaaggttccaggtttcaag
gccggcaaaggcctgaaagacgccgtcaactaa
DBGET
integrated database retrieval system
