Pseudomonas inefficax: RIN61_20865
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Entry
RIN61_20865 CDS
T09811
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pix01002
]
RIN61_20865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
RIN61_20865
Peptidases and inhibitors [BR:
pix01002
]
Cysteine peptidases
Family C82
RIN61_20865
Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RIN61_20865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
WNN38623
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Position
4607996..4608973
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AA seq
325 aa
AA seq
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MLPRFPAVTRSLSLAALLVAGPAVALELPLPPPGEDIIGQVQVIKAKYEDTFADIGTAND
LGYLEMIAANPGVDPWLPGAGTEIILPTRYILPPGPREGIVINLAEYRLYYFPKGQNVVH
TFPLGIGREGWGSPIANTKITAKTPNPTWTPPASIRAEHAADGDILPSVVPAGPDNPLGP
FKFTLGVPGYLIHGSNKKFGIGMRTSHGCFRMLNNNVLELSKMVPVGTPVRIINEPYKFG
ISGGKVYLEAHTPLDDQGNPSVVDKHTAVINALLKREDLANNLRMNWDMVRDVVAAEDGM
PVEIAVPTESQGGAPMVSSIPPELQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgctttcctgccgtcacccgtagcctgtccctggccgccctgctggtagca
ggccccgctgttgcgctggagctgccactgccaccacccggtgaagacatcatcggccag
gtgcaggttatcaaggcaaagtacgaggacacgttcgccgatatcggcactgccaacgac
ctcggctacctggaaatgatcgccgccaaccctggggtggacccgtggctgccaggtgcc
ggcaccgagatcatcctgccgacccgctacatcctgccgcctggcccgcgtgagggcatc
gtcatcaacctggccgagtaccgcctgtactacttcccgaaagggcaaaacgtggtgcat
accttcccgctggggatcggccgtgagggctggggatcgccgatcgccaataccaagatc
accgccaagacgccgaacccgacctggaccccgccggcgtcgatccgtgccgagcacgcg
gctgacggcgacatcctgccgagcgtggtgccggccggcccggacaacccgctggggccg
ttcaagttcaccctcggcgtgccgggctacctgatccatggttcgaacaagaagttcggc
attggcatgcgtaccagccacggttgcttccgcatgctcaacaacaacgtgctggagttg
tcgaagatggtcccggtgggtacgccggtgcgcatcatcaacgagccctacaagttcggt
atcagtggcggcaaggtctatctggaggcgcacacgccgctggacgaccagggtaatccg
tcggtggtcgataaacacactgctgttatcaacgccttgctcaagcgtgaggatctggcc
aataacctacgcatgaactgggacatggtgcgtgatgtggtggccgctgaagatggcatg
ccggtggaaattgccgtgccgactgaaagccagggtggcgcaccgatggtttcgagcatt
ccgcccgaactgcagtaa
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