Pseudomonas inefficax: RIN61_21005
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Entry
RIN61_21005 CDS
T09811
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_21005
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIN61_21005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WNN38648
LinkDB
All DBs
Position
complement(4639683..4640549)
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AA seq
288 aa
AA seq
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MDIDQARTFLEIVRCGSLVAAAERLFVSQTAITARVQRLEQQLGCQLFVRSRNGASLTSD
GEAFVSYANQLVQTWEAARRDLPLPEGCQQVLHVGGEVSLGNPMMLDWVSALHRELPSHA
IRSEVSDGESLLRKVEMGLLDAALVYQPTYGPGLQVEQLMEEKLIRVRRVDQPDPYIYID
WGEAFRRQHDAALPDCARPALSFNLGPLALQFILDQGGSGYFRTRVVQAYLDSGVFERVP
QAPEFTYPTFLVYPRKRDSEALQQAFAILRRLVAAGASDWSQRWDPVI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatcaggcccgtacctttctggaaatcgtgcgttgcggcagcctggtcgcc
gccgccgaacgcctgttcgtgtcacagacagcgatcaccgcgcgggtgcagcgcctggag
cagcaactgggctgccaactgttcgtgcgcagccgcaacggtgccagcctgaccagcgac
ggcgaagcgttcgtcagttatgccaaccagctggtgcaaacctgggaagcggcgcgccgc
gacctgccgctgcccgaaggctgccagcaggtgctgcacgtgggtggtgaagtaagcctg
ggcaacccgatgatgctcgactgggtcagcgccctgcaccgcgagctgcccagccatgcc
atccgcagcgaggtgagcgatggcgaatcgctgctgcgcaaggtcgagatggggctgctg
gatgccgcgctggtctatcagcctacctatggcccgggcctgcaggtggagcagttgatg
gaggagaagctgatccgtgtgcgccgggtcgaccagccagacccgtacatctacatcgac
tggggcgaggccttccggcgccagcatgatgctgccctgcccgactgcgcgcgcccggcg
ctcagcttcaaccttggcccgctggccttgcagttcatactcgaccagggcggcagtggc
tacttccgcacgcgggtggtgcaggcctatctggacagcggtgtgttcgagcgggtaccg
caggcgccggagttcacctacccgaccttcctggtgtacccgcgcaaacgcgacagcgaa
gccctgcaacaggcttttgccatcctgcgccggctggtggccgccggcgccagcgactgg
tcacaacgctgggacccggttatctga
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