Pseudomonas inefficax: RIN61_22250
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Entry
RIN61_22250 CDS
T09811
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pix
Pseudomonas inefficax
Pathway
pix02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
RIN61_22250 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pix02044
]
RIN61_22250 (tssK)
Secretion system [BR:
pix02044
]
Type VI secretion system
Imp/Vas secretion system core components
RIN61_22250 (tssK)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WNN38886
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Position
4929994..4931349
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AA seq
451 aa
AA seq
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MKIDRPLWASGVVLSAQQFQQQARFESWTNQCIASLALVHPWGIRHVAFDAEALRLGKLM
ATRLQLCLPDGTLIDTDRLDRLPGALELSRVLPGDIQTATVVLALPLEQANGNNCLFEGN
SVERPVRYHQVWRDTKDLYTGEMQSISVLEQALSLRLADDDNADYLTCPVARLLRDGRDG
WAIDDSYIPPLLRFDAHAGLLLQLDNLLTQLSAKRERLMGMRRESNQRMAEFAVADVTLF
WLLNALNTYQPVLADLKAQPGRHPEQVYQQLVKFAGGLLTFSLDQHIEDIPAYQHADLEA
VFPPLMRTLSTLLEASLPSRVLALSLEARSANRWQVSLSDPRLLEPEGADFYLSVRCRLP
AVQVQSQFPRLCKVGSPDDVDHLVNAALDGVPLKPLSHVPAAIPLRLDNQYFALDLSHAK
GRAMLADGVCALYVPSVFQDVQLELFAVLRS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgatcggcctttatgggcgtccggcgtggtgttgtctgcgcagcaatttcag
cagcaggcccgctttgaatcgtggactaatcaatgtattgcctcactggccctggttcac
ccttggggcatccgtcatgtagcgtttgatgcagaggcgctgaggttgggcaagctgatg
gccactcggcttcagttgtgcctgccagacggtactttgattgacaccgatcggttggat
cgactgcccggtgccctggaactctctcgggtattgcccggtgatatccagacggcaacg
gttgtgctcgctttgccactggaacaggccaatggtaacaactgcctgtttgagggcaac
agcgtcgagcggccagtcagatatcaccaggtatggcgtgataccaaggatctgtacacc
ggcgaaatgcagtcaatcagcgtgctcgaacaggcgctgagcttgcgtctggctgacgac
gataatgcggactatctcacgtgcccggtggcccgtttgctgcgtgatggccgggatggg
tgggcaattgatgatagctacatcccgcccttgctgagatttgatgctcatgccgggttg
ttgcttcagctcgacaacttgctgacccagctgtccgccaagcgtgagcggttgatgggg
atgcgtcgggagagcaaccagcgcatggcggagtttgctgttgcggatgtcacgctgttc
tggttgctcaatgcgctgaacacgtatcagccagtgctggctgacctgaaagcgcagcct
ggtcggcatccggaacaggtgtatcagcagttggtgaagttcgcaggcggtctgctcacc
ttttccttggaccagcatatcgaggacatacctgcctaccagcacgcagatcttgaagca
gtcttcccgccgttgatgcgtaccctttctacattgctggaggcgagcctgccgtcacgt
gtgctggccttgtccctggaggcacgcagcgcaaaccgttggcaggtttccctgagcgat
ccacgcttgcttgagccagaaggtgctgacttctatctctcggttcgctgtcggctgccg
gccgttcaagttcaaagccagttcccccggctgtgcaaggtcggctcccccgatgatgtg
gatcatctcgtcaatgcggcgctcgatggcgttcctctgaaacctttgagccatgtgccg
gcggcaataccgctgcgtctggataatcagtacttcgcactcgaccttagccatgcaaaa
gggcgtgcgatgctggctgatggggtctgtgcgctctatgttccgagcgtgtttcaggat
gtccagctcgaattgttcgcggtgcttcgctcatga
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