Pseudomonas inefficax: RIN61_22360
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Entry
RIN61_22360 CDS
T09811
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN61_22360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_22360
Transporters [BR:
pix02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIN61_22360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
WNN38908
LinkDB
All DBs
Position
complement(4960214..4961257)
Genome browser
AA seq
347 aa
AA seq
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MTHKQRLLALFCTVPGLFACLPAMAQPTLYLGMNGGTMERLFSDNILPRFEQANGVKVVI
VPGTSADILAKVQATPNKPSIHVMVLDDGIMYRAIGMGLCSTLKPNPTLAQLPEKALIKD
KAAAVSLGVTGLAYNSRLFKANGWAAPTSWNDLADPRFKDKVVFQSMASSTFGLHGFLMY
NRLHGGSDTDVNPGFTAWQKNVGPNVLEYIPNSAKLSEMVQTDEAALFPLTPTQVTALKL
KGIPVEYAAPKEGAVVLNQAECVTANNDQPELAQKLAEFLLSPEAQSPALELGDQIPSNP
NTPTSDKTRGQVEAMQTYLQTAVTIDWDQVNTQRPEWNARWNRQIER
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaagcaacgtttgctcgccctgttctgcaccgtgcccggcctgttcgcctgc
ctgcccgccatggcccaacccacgttgtacctgggcatgaacggcggcaccatggagcgg
ttgttcagcgacaacatcctgcccaggttcgagcaggccaacggggtgaaggtggtgatc
gtccccggcacctcggccgacatcctggccaaggtccaggccacgccgaacaagccgtcg
atccatgtgatggtgctggatgacggcatcatgtaccgcgccatcggcatgggcctgtgc
agcacgctcaagcccaacccgaccttggcccagttgccggaaaaggccctgatcaaggac
aaggccgctgcagtcagcctgggtgtgaccgggcttgcctacaacagccgcctgttcaag
gccaacggctgggcagcgcccacctcgtggaacgacctggccgacccgcgcttcaaggac
aaggtggtgttccagtcgatggcatcgtccaccttcggcctgcatggtttcctgatgtac
aaccgcctgcacggcggcagcgataccgacgtcaacccgggcttcactgcctggcagaag
aacgtgggcccgaacgtgctggagtacatccccaactcggccaagctttcggaaatggtg
caaaccgacgaagccgcgctgttcccgctcacccccacccaggtgacggcgctgaagctc
aaaggcatcccggtggagtacgctgcgcccaaggaaggtgccgtggtgctcaaccaggcc
gaatgcgtcacggccaacaacgaccagccggagcttgcgcagaagctcgccgagttcctg
ctcagccccgaggcgcagtcgccggccctggagctgggtgaccagatcccgtccaacccc
aacacgcccaccagcgacaagacccgtggccaggtcgaagccatgcagacctacctgcag
actgccgtgaccatcgactgggaccaggtcaacacccagcgccccgaatggaacgcgcgc
tggaatcgccagatcgagagataa
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