Pseudomonas inefficax: RIN61_22860
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Entry
RIN61_22860 CDS
T09811
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_22860
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIN61_22860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
AGAO-like_N2
Motif
Other DBs
NCBI-ProteinID:
WNN38999
LinkDB
All DBs
Position
5069392..5070312
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AA seq
306 aa
AA seq
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MELRQLRYFLSVLEYGSLGRAALELGVGASALSQQLSKLESEVSTRLLTRSSTGVSPTAA
GLAFEYHARLALRQAEHAVLAAQSGRMSGYASVGLAPTTASILGLALIDRMRERYPDIRL
HLVEMLSGYLMNQLNARHLDLAVLFQAETGPRLDVRTLLTERLFVLVPAPLVKAEWGESL
TLQQIATLPLVMPSTQHGLRTTLRSIFERAGLEASIVMEVDGLSLLMDCVCAGHAATIQP
GATVARAHQAGLRVFAIDEAQAQRRNVIVSLTDDELSPAALATRIVLQEVARDLVEQGRW
PGARLL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagttacgtcagcttcgctatttcctcagtgttctggagtacggcagtcttggcagg
gctgcgctcgagctaggggttggcgcctcggcattgagccaacaactgtcgaagctggag
agcgaggtgagtacccggcttttgacacgttcgagcaccggcgtttcgccgacggcggcg
ggcctggccttcgaataccatgcgcgcctggcgcttcgccaggcggaacacgccgtgctg
gcggcacaaagtggccgcatgagcggctatgccagcgtggggctggcaccgaccactgca
tcgattcttggcctggcgttgatcgacaggatgcgcgaacgctacccggacatccgtctg
cacctggtggaaatgctgtccggttatctgatgaaccaactcaatgccaggcaccttgac
ctggcggtgctgttccaggcagaaacgggaccgcggctggatgtccggacgcttctgacg
gagcggcttttcgtgctggttcccgccccgctggtcaaggcagagtggggcgagtcgctc
acgttgcagcagatcgcgacgctccccttggtgatgcccagcacgcaacatggcctgcgc
acgacgttgcgctcgattttcgagcgggcagggctggaggccagcatcgtcatggaagtg
gatggtttgtcattgttgatggactgcgtgtgtgcgggccatgccgccaccatccagccc
ggcgcgacagtggcccgggcgcatcaggcgggcctgcgcgtgtttgccatcgatgaagct
caggcgcagcgtcgcaacgtgattgtcagcctgaccgatgacgagctctcgccggccgcg
ttggcgacacggatcgtactgcaggaggtcgctcgggatctggtggaacagggccgatgg
cctggggcccggctgctttga
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