Pseudomonas inefficax: RIN61_23340
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Entry
RIN61_23340 CDS
T09811
Name
(GenBank) efflux RND transporter permease subunit
KO
K21134
multidrug efflux pump
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_23340
Transporters [BR:
pix02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RIN61_23340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WNN39093
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All DBs
Position
5171169..5174285
Genome browser
AA seq
1038 aa
AA seq
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MSSKPKLDKEQAGFNLSAWSIGQKPLMFFLMLITLVGGMISYENLSRNEDPAFTIKTMVV
AARWPGANIEDTTNLLTDRLEKKLEEIPYLDRLDSYTRPGETVIMVNLRDDAPSQIVPDA
WYQVRKKMADIGATLPAGVQGPFFDDEFGDTYGQIFGFTGEGFSDRELRDYLEGVRAELL
RLPSIGKVQLLGVQEEQIVVEFSPARLAAFGLDEEAILHALKAQNAVIPSGTVRLPDDKI
ALRVSGGFASEESLRSLTLRADNRFVPLTELVDIRRIPADPPAPLFRVNGEKALGLAVSM
AAGGNLLEFGEAVRARMNEVGATLPYGIEMAQVADQSTVVKQAVSGFLTVLAEAVAIVLA
VSFLSLGVRAGLVVSISIPFVLALTFIGMEIMGIGLQRISLGALIIALGLLVDDAMITVE
AMVGKLEEGWNLSRAASFAYESTAFPMLTGTLVMIAGFIPVGFAASSAGEYCYSMFMVVL
ISLSASWVVAVLFSPLLGTMILPEALPHHEHGGGKLMGAYRRALGWVLQHRAITLGAAVT
AFVASLGAASYLEQQFFPPSDRPELLVSLTLPQNASLDATEREAAKLEKLLKADPAVERF
STYIGSGAIRFYLPMEVLLQNENITQTVVIAKGVKERDALQARLAESFKTEFSGLIARAT
PLELGPPVGWPLKYRVTGPDQATVRDLASRLANILSANSDTREVHLLSGEPQRSVLVKVD
QTQARALGLSSEDVASALATIFSGSAVTSVRDKDRLVDVIVRAQSGERTDLATLANLQIR
TPQGHTIPLSQIAVLSYGVEDPIIWRRQRLPLITVQGDVREGLEAATVVQALAPAVTDFA
AQLPKGYNIATGGAVEEAAKGSASLAAVLPITALVMCVLLMVQLRSFSRMFLALAMAPFG
LIGVVMAMLPTGTPMGFVAQLGVIALVGMIVRNAVILIEEVDINISTGQSPREAITHAAI
HRARPIVLTACAAILGMIPIAPQIFWGPMAFAVIGGLAVATIITLTVLPCALLLLLQWEH
RNGQPRHAEHPVVLQEHN
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagccaaaactcgataaagagcaggccggcttcaacctctcggcgtggtcg
atcggtcaaaagcctctgatgtttttcctgatgctcattacgctcgttggcggaatgatc
agctatgaaaacctgagtcgaaacgaagatcctgcgttcaccatcaaaaccatggtggtc
gctgcgcgctggcccggcgcgaacattgaagacacgaccaatctgctgactgatcggctg
gaaaagaaactggaagagataccctatctcgaccgactcgatagctacacccgtccaggc
gaaaccgtcatcatggtcaacctgcgcgatgatgctccgtcgcagatcgtccctgatgcg
tggtaccaggttcgcaagaaaatggcagatatcggcgcaacgcttccggcgggtgttcaa
gggccattttttgacgacgagtttggcgatacctatggccagattttcggctttaccggc
gaaggcttttccgaccgggagctgcgtgactaccttgagggcgtgcgtgcggagctactg
cgccttcccagcattggcaaggtgcaactgctcggtgtgcaagaggagcagatcgtcgtg
gaattttcacctgccaggcttgcggcttttggcttggacgaagaggcgatcctgcacgcg
ctgaaggcgcaaaacgctgtcattccttccggaacggtacggttgcctgatgacaagatc
gcgctgcgagtcagcggagggtttgcctccgaggaaagtttgcgcagtttgacgttgcga
gctgacaaccggtttgtgccactgaccgagcttgtcgatatccgcagaatcccggccgac
ccgccagcgccattgttccgggtgaacggcgaaaaagcgctcggccttgccgtttcgatg
gctgcgggcggcaatctcctggagtttggagaggcggtgcgggcccgtatgaatgaggtc
ggggcgacccttccctacggtatcgaaatggcgcaggtagccgaccagtctactgtcgtg
aagcaggcggttagcgggtttctgacggtgttggctgaggcagttgcgatcgtcctggca
gtgtcgtttctgtcactcggtgtgcgtgccggcctggttgtgagtatttcgatcccgttc
gtgttggcgttgacgttcatcgggatggagatcatgggtatcggtcttcagcgaatctct
ctgggcgcgttgattattgcgttggggctgcttgtcgatgacgcgatgatcaccgtcgag
gccatggtcgggaaactggaagaaggctggaacctgtcgcgggcggcgagctttgcctac
gagtcaacagcgtttccaatgttgacgggcacgcttgtcatgattgccgggttcattcca
gttggcttcgcggcttcaagtgccggcgaatactgctactcgatgttcatggtggtattg
atttcattatcagcatcctgggtggtagcggttctgttttcacccttgcttggcaccatg
attctacctgaggctctgccgcaccatgagcatggcggaggtaaactcatgggcgcctac
cggcgggccttgggctgggttctgcagcatcgcgcaataacgctcggcgctgcagtcacg
gcttttgtcgcctccctcggcgctgcatcttatcttgagcagcagttctttccgccctcg
gacaggccagagctgctggtaagcctgacgctgccgcaaaatgcttccctggatgcgacg
gagcgcgaagcggcaaaactcgagaagttgcttaaagctgaccctgctgtcgagcgtttt
tccacctatatcggctctggggctatccgtttctatctgcccatggaagttttgctgcag
aacgagaacatcacgcaaactgtcgtgatcgccaaaggggtcaaagaacgggatgccctg
caggcgcgcctggctgagagtttcaaaacagagttttccggcctcatcgcgcgcgcgact
ccgcttgaattgggcccgccggtgggctggccgttgaagtaccgtgtcaccggcccggat
caggctacggtgcgtgatttggcgtcgcgcctggccaacattttatctgccaactccgac
acccgtgaggtccatcttctatcaggcgagccgcaaagaagcgtcctggtcaaggttgac
cagacccaggcacgagcattgggcctgtcttcagaggacgttgccagtgccctggcgacg
attttctctggctctgcggtgaccagcgtgcgtgacaaggaccgtcttgtggacgtgatc
gtacgggcgcaaagcggtgagcgaaccgaccttgcgacccttgcgaacctgcagatacgt
acacctcaaggccataccattcccttgagccagattgctgtcctcagctatggcgttgaa
gacccgatcatctggagacggcagcgtcttcctctgatcactgtgcaaggggatgttcgc
gaagggctagaggctgcaacggtcgtgcaggcactggcgccagcggtaacggattttgct
gcgcagctacccaagggctacaacatcgcgacaggcggagcagtcgaggaggctgcgaaa
ggcagtgcgtcactggctgctgttctgcctattacggcgttggtgatgtgcgtgctgttg
atggtgcagttgcgtagtttctcgcggatgttcctggcgctggcgatggcgccgttcggc
ttgatcggtgtggtcatggcgatgttgccgaccgggacacctatggggttcgtcgcacag
cttggtgtaattgcacttgtcggtatgatcgtccgcaatgccgttatcctgatcgaagaa
gtggatatcaacatcagtaccggccagtcgccgcgtgaggctatcacgcatgccgccatt
caccgggcgcgccccattgtgttgacggcttgtgcggcaattctcgggatgattccaatc
gcgcctcagattttctgggggcccatggcttttgcggtcatcggcgggcttgccgttgcc
acgatcattacgttgacggttctaccctgtgccttgttgcttttgctgcaatgggaacat
cgaaatggtcaacctcgacacgcggaacatccagtggtgttgcaagagcacaactag
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