Pseudomonas inefficax: RIN61_23350
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Entry
RIN61_23350 CDS
T09811
Name
(GenBank) MexC family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K18295
membrane fusion protein, multidrug efflux system
Organism
pix
Pseudomonas inefficax
Module
pix_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_23350
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_23350
Transporters [BR:
pix02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RIN61_23350
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
RIN61_23350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
UBA_HOIP
Trimer_CC
Motif
Other DBs
NCBI-ProteinID:
WNN39095
LinkDB
All DBs
Position
5174847..5175989
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AA seq
380 aa
AA seq
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MGKIHTIGMGGLLAVAVALAGCGAGEEPQAASAAVVPVETVTVTTEQLALASTLPGRVEP
MRVAEVRARVAGIVLHKRFEEGADVKAGDVLFQIDPAPFKVALARAEGDLARAQAVQQEA
QARVKRYEPLVKIEAVSQQDFDSATAELRSAQAAVRTAQADVQTARLNLGYATVTAPISG
RIGRALTTEGALVGQGDATLMARIQQLDPIYVDFTQSAADALRLRQALKEGALTGGEDKA
LSAQVEGTDYQRQGALMFTDVAVDRGTGQVTLRGRFDNRDGILLPGMYVRVRTPQGTDQQ
AILVPQRAVQRGSDGMARVMVVGTDNLAEVRSVRTGVMQGSRWQISEGLRAGDQVIVGSP
AGLAPGMPVAPAQAQQAAAH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatacatacgatagggatgggtgggctgctagctgttgcggtggcgttggcc
ggttgcggagcgggtgaggagccacaggccgcctctgcagcggttgtgcccgtggagacc
gtgacggtgacgaccgaacagttggcgctggcctcgacgctgcctggcagagtcgagccg
atgcgggtagcagaggtacgtgcccgtgtggccggtatcgtcttgcacaagcgctttgaa
gaaggtgccgacgtcaaggccggcgatgtgctgttccagatcgacccggcgccattcaag
gtggccctggcgcgcgccgaaggcgatctggcgcgtgctcaggcggtacagcaagaggct
caggcacgggtcaagcgctacgagccactggtcaagatcgaagctgtcagccagcaggat
ttcgatagcgctaccgccgagctgcgtagtgctcaagccgctgtgcgtacggcacaggcc
gatgtgcagaccgcacgtctgaatcttggttatgccacggtaaccgcgcccatttccggc
cgcatcggccgcgccctgaccactgaaggcgcgttggtcgggcagggcgacgccacgttg
atggcgcgtatccagcagcttgatccgatctatgtcgacttcacccagtctgccgccgat
gccctgcgtttgcgtcaggcgctcaaggaaggtgccctgacaggtggcgaagacaaggct
ctgagcgcccaggtggaaggcaccgattaccagcgccagggcgcgctgatgttcaccgat
gtggcggtcgaccgtggcaccggtcaggtcaccttgcgcgggcgcttcgacaaccgcgac
ggcatcctcctgcctggcatgtatgtgcgcgtgcgcaccccgcagggcaccgaccagcag
gccatcctcgtgccgcaacgggcagtgcagcgtggcagcgacggcatggcacgggtgatg
gtcgtggggaccgacaacctggccgaggtacgcagtgtgcgtaccggcgtgatgcaaggc
tcgcgctggcagatcagcgaaggcctgcgtgccggtgaccaggtcattgtcggcagcccg
gccggattggcccctggcatgcccgtggcgccggctcaggcgcaacaggccgcggcgcac
taa
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