Pseudomonas inefficax: RIN61_23750
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Entry
RIN61_23750 CDS
T09811
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_23750
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIN61_23750
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ARID
Motif
Other DBs
NCBI-ProteinID:
WNN39173
LinkDB
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Position
complement(5273170..5274141)
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AA seq
323 aa
AA seq
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METSLSTPGNLPGKTGIRAPMALSGQDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQ
ISDLEIRIGMRLCSRGREGFSLTDEGKVVYQASIDLFNSVENFRDRISSTKNELIGDLSI
GVIDNTIFDSGSPLIAAIRTMADEAPKVRVRLSVSQLDEVERGVVEGRFVSGIVPVYQRR
EEFDYFEMYEEKSTLYCAVGHELFEKVDEEIELEQLKKYSFVNHRYAIHAAKREFFDYDE
SSTSATQVEAVAMLILTGRFIGFLPCHYASQLVKDGRLRAIRPDVVKLLTPFSLILRHNA
PRSPLVKAFADFMNIDLKLAITG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcactttccacgcccggaaacctgcccggaaagacaggaatcagagcgccg
atggcgctgagcggacaagatttcaaactgctgaaagtcttcaaagctgttgtagaagcc
gggggctttagtgcagcccagaacgagctgaatgtgggcctcgcggcgatcagtaaacag
atttcggaccttgaaattcgcatcggaatgcgcctgtgcagccgcggtcgagagggcttc
agcctgacggacgagggcaaggtggtttatcaggcgtccatcgacttattcaattcggtg
gaaaacttccgagacaggataagttccacgaaaaatgaattgattggggacctgagtatc
ggtgtcattgataacacgatatttgattcaggctctccgctgattgcggcgatcagaacg
atggccgatgaggcacccaaggtgagggtgcgattgagtgtttcgcagttggatgaagtg
gagcggggcgttgtcgaggggagatttgtttcgggtatcgttccagtttaccagcgaagg
gaggaatttgattattttgaaatgtacgaagaaaagtcgacactgtattgcgctgtaggg
catgaattgtttgagaaggtggatgaagaaattgagttggaacagttgaaaaagtacagc
ttcgtcaatcatcgctatgccatacatgcagcaaaaagagagttctttgactacgatgaa
agttcaacgtctgccacgcaggtcgaagccgtcgcgatgctgatcctgaccggcaggttc
atcggttttcttccatgccattatgccagtcaactcgtcaaagacgggcgtttgcgggct
attcgcccagatgtcgttaaattgttgacgcccttcagcctaatcttgcgccataacgcg
ccacgcagtccgctggtcaaagcatttgcggactttatgaacattgacctaaaactcgcg
ataacagggtaa
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