Pseudomonas inefficax: RIN61_24050
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Entry
RIN61_24050 CDS
T09811
Name
(GenBank) beta-eliminating lyase-related protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00260
Glycine, serine and threonine metabolism
pix00460
Cyanoamino acid metabolism
pix00630
Glyoxylate and dicarboxylate metabolism
pix00670
One carbon pool by folate
pix00680
Methane metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
pix01230
Biosynthesis of amino acids
pix01240
Biosynthesis of cofactors
pix04981
Folate transport and metabolism
Module
pix_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIN61_24050
09102 Energy metabolism
00680 Methane metabolism
RIN61_24050
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIN61_24050
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RIN61_24050
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIN61_24050
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIN61_24050
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RIN61_24050
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Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WNN39226
LinkDB
All DBs
Position
complement(5339993..5341249)
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AA seq
418 aa
AA seq
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MWPVVDHLGALSMSLMATPLHGFMQELLCTVKIGWRAERGRLNLGPSDSLAQRELFSDVH
CMPGQRVYRLGPEETTRELRALARHLFEAPFASFAPCSGAQANQAVFRALLQPGDRVLCL
PDAELESTLDTLYVSATTPRLVRQRAVFQGNGLVDYQTLVDQVLAAPPRCIVAGYSNHTR
MHDYRALRHLADRVGALLIIDISRIAGLVAAGLHPNPLGWADVLTGATHKSLQGPRGGFF
MTRDEALFGRLQAVFEQRRGVSMPQRVRLGLLRCLQQARSPLQVARQQMALDNARAMAEV
FNKQMLQVFSGGTDTQTVMLELTPLGLTNRQAQVALGRLGITLERRLDLHNTHLVLNTLP
ASMRGLDPQACARLASAIGTTLQQPNDLKTVSLAIASVDRLCADHPPLLSAMDHILLQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtggccagtcgttgatcacctgggagcactgagcatgagcctgatggccaccccgctc
cacgggtttatgcaggaattgctgtgtaccgtgaagatcggctggcgcgccgagcgcggt
cggcttaacctcggcccgtcggacagcctggcacagcgcgagttgttcagcgatgttcac
tgcatgccagggcagcgggtgtaccgcctggggccagaagaaaccacgcgcgagctacgg
gcactggcccggcatctgttcgaggcgccgttcgccagctttgccccctgcagcggcgcc
caggccaaccaggcggtgttccgagccctgctgcaaccgggggacagggtgctgtgcctg
cccgacgcagaactggaaagcacccttgacacgctttacgtctcggctaccacgccacgg
ctggtacgccagcgtgcagtgttccaaggcaacggcctggtggactaccagaccttggtc
gaccaggtgctggcagcgccgccccgatgcatcgtcgcgggctattcaaaccatacccgc
atgcacgactaccgggcactgcgtcatttggccgaccgtgtcggcgcgctgctgatcatc
gacatctcacggatcgccgggctggtcgccgccggactgcatcccaacccccttggctgg
gccgacgtccttaccggcgctacccacaaatccctgcaaggtccacgtggcggctttttc
atgacccgcgacgaggcgctgttcggccggctccaggcggtgttcgagcaacgccgtggc
gtcagcatgccgcagcgggtacggttggggctgctgcgctgcctgcaacaggcgagatca
ccgttgcaggtcgcccggcaacaaatggctctggacaacgcccgcgccatggccgaggtt
ttcaacaaacaaatgctacaggtgttttccggcggcaccgatacccagaccgtgatgctg
gagctaacgcctcttgggttgaccaaccgccaggcccaagtggcgctcggtcgcctaggc
attaccttggaacggcgcttagacctccacaacacgcaccttgtcctcaatacccttccg
gccagcatgcggggcttggatccccaggcctgcgcacgcctggccagtgccatcggcacc
acgctgcaacaacccaacgacctgaaaaccgtgagtctggccatagccagcgtggaccgg
ctgtgtgccgaccatccgcccttgctcagcgccatggatcacatacttctccaataa
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