Pseudomonas inefficax: RIN61_24120
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Entry
RIN61_24120 CDS
T09811
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00260
Glycine, serine and threonine metabolism
pix00460
Cyanoamino acid metabolism
pix00630
Glyoxylate and dicarboxylate metabolism
pix00670
One carbon pool by folate
pix00680
Methane metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
pix01230
Biosynthesis of amino acids
pix01240
Biosynthesis of cofactors
pix04981
Folate transport and metabolism
Module
pix_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIN61_24120 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RIN61_24120 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIN61_24120 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RIN61_24120 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIN61_24120 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIN61_24120 (glyA)
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RIN61_24120 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WNN39240
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All DBs
Position
5358017..5359270
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AA seq
417 aa
AA seq
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MFHKSLTLNDFDPVLAAAIDSETRRQEDHIELIASENYTSPQVMAAQGTALTNKYAEGYP
AKRYYGGCEHVDVVEQLAIDRACALFGADYANVQPHSGSSANAAVYLALLSAGDTILGMS
LAHGGHLTHGARVSSSGKLYNAVQYGIDAKGLINYDEVERLALEHRPKMIVAGFSAYSQV
LDFQRFRDIADRVGAYLFVDMAHVAGLVAAGLYPNPVGLADVVTTTTHKTLRGPRGGLIL
ARSNPDIEKKLASAVFPGAQGGPLMHVIAAKAVCFKEALTPEFKVYQQQVLDNAVAMAEV
FKSRGYEVISDGTRNHLFLVSLIRQGITGKDADAALGRARITVNKNAVPNDPQSPFVTSG
IRIGTPAITTRGLGVSESQELAGWICDILDHLGDADVEAHVAQQVARLCCAFPVYGL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaaaagtctgaccctcaacgacttcgaccccgtcctggccgccgcgatcgac
agcgagacccggcgccaggaagatcacattgagctgattgcgtcagaaaactacaccagt
ccccaggtgatggccgctcaaggcacagccctgaccaacaaatacgccgagggttatccg
gccaagcgctactacggtggctgcgagcacgtcgacgtcgtcgaacaactggccatcgac
cgtgcctgtgcgctgttcggtgccgactacgccaacgtgcaaccgcactcgggttcctcg
gccaacgcggctgtctacctggcgctgctcagcgcgggagataccatcctgggcatgagc
ctggcccatggcggtcacttgactcacggggccagggtcagctcttccggcaagctgtac
aacgctgtccagtacggcatcgatgccaagggactgatcaactacgacgaagtcgagcgc
cttgcgctcgagcatcgtccgaagatgatcgtcgcgggtttttcggcctattcgcaggtc
ctcgacttccagcgtttccgcgatatcgccgaccgggtgggggcctacctgttcgtcgac
atggcccacgtcgccgggctggtcgctgctgggctctatcccaacccggtcggtctggcg
gacgtggtcactaccactacccacaagaccctgcgcggtccgcgcggtggcctgatcctg
gcccgtagcaaccccgatatcgagaagaagctggcctcggcggtgttccctggggcacag
ggtggtcccctgatgcatgtgatcgcagcgaaagccgtgtgtttcaaggaggcgctgacg
cccgagttcaaggtctaccaacagcaggtgctggacaacgccgtggccatggcagaggtg
ttcaagtcgcgaggttacgaagtcatctccgatggcacccgcaaccatctgttcctggtc
agcctgatccgccaggggatcaccggtaaggacgcggacgctgcgctcggccgggcgcgc
atcacggtaaacaagaacgcagtgcccaacgatccgcagtcgcctttcgtgacctccggt
atccgcatcggcacgccggcgatcaccacccggggcctgggcgtcagcgaaagccaggag
ctggccggctggatctgcgacatcctcgatcacctcggcgacgccgatgtggaagcccat
gtggcgcaacaggtagcacgcctgtgctgcgcattcccggtctacgggctgtga
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