Pseudomonas inefficax: RIN61_24740
Help
Entry
RIN61_24740 CDS
T09811
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN61_24740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
bMG3
SdrD_B
Big_10
CarboxypepD_reg
BapA_N
Motif
Other DBs
NCBI-ProteinID:
WNN39358
LinkDB
All DBs
Position
5495796..5503931
Genome browser
AA seq
2711 aa
AA seq
DB search
MSIQAKVSPLAQSVTSAAPIAIPDNGILTLTQSSNIVLDIAPESVTGYEKSGADLIVQLK
SGESLRIANFYAEGQPASQLYLVDRDKLLAVDLPPVAADGPLVAGYVPQETPAGFESLTG
TDGTVAGLSPGGALLAGAAIIGGGVAIANSNGGGGGGGGGDSSVQPDTTAPAPASGLQIA
PDGSSISGTAEPGATVGIDSNGDGQTDVSVVVGSDGKFQIPLDPPLTNGETVSVVVTDPA
GNSSPPATVQAPDFPDAPQINPSNGSSLSGTAQPGSTVVLTDGNGNPIGQTTVDSNGNWS
YTPDSPLPDGTVINAVVVDAAGNSGPPASTIIDGVAPAAPLINPSNGTELSGTAEPNSTV
TLTDGDGNPIGQVTADGSGNWTYTPGTPIADGTVINVVAQDAAGNTSAPTSTTVDAQAPA
APVVNPSNGTTISGTAEPGSTVTLTDGSGNPIGQVTADGSGNWSFTPGSPLPNGSVVNAT
ATDPTGNTSAPSSTTVDTVAPAAPVIEPSNGSEISGTAEPSSTITLTDGSGNPIGQTTAD
GSGNWSFTPGTPLPDGTVVNATATDPAGNTGGQGSTTVDGVAPAVPTINLSNGSSLSGTA
EPNSTVTLTDGSGNPIGEATADGSGNWTFTPATPLPNGTVVNATASDAAGNTGPAATVTV
DSSAPAAPVINPSNGASISGTAEAGATVTLTDGSGNPIGQVTADGSGNWSFTPGSPLPNG
SVVNATATDPTGNTSAPSSTTVDTVAPAAPVVEPSNGSEISGTAEPGSTITLTDGSGNPI
GQTTADGSGNWSFTPGTPLPDGTVVNATATDPAGNTGGQGSTTVDGVAPGIPTVNLSNGS
SLSGTAEPNSTVTLTDGSGNPIGEATADGSGNWTFTPATPLPNGTMVNATASDAAGNTGP
AATVTVDSSAPAAPVINPSNGTTISGTAEAGATVTLTDGSGNPIGQVTADGSGNWSFTPG
SPLPNGTVVNATATDPTGNTSAPSSTTVDTVAPAAPVVEPSNGSEISGTAEPGSTITLTD
GSGNPIGQVTADGSGNWSFTPGTPLPDGTVVNATATDPAGNIGGQGSTTVDGVAPAVPTI
NLSNGSSLSGTAEPNSTVTLTDGSGNPIGEATADGSGNWTFTPATPLPNGTVVNATASDA
AGNTGPAATVTVDSSAPAAPVINPSNGSTISGTAEAGATVTLTDGSGNPIGQITADGSGN
WSFTPGSPLANGTVIIATATDPTGNTGPQAATTVDSVAPAAPVVEPSNGNEINGTAEPGS
TITLTDGSGNPIGQATADGSGNWSFTPGTPLPDGTVVNATATDPAGNTGGQGSTTVDGVA
PGIPTVNLSNGSSLSGTAEPNSTVNLTDGSGNPIGEATADGSGNWTFTPATPLPNGTVVN
ATASDAAGNTGPAATVTVDSSAPAAPVINPSNGATISGTAEPGATVTLTDFGGNPIGQIT
ADGSGNWSFTPGSPLANGTVIIATATDPTGNTGPQAATTVDSVAPAAPVVEPSNGSEISG
TAEPGSRVILTDGSGNPIGQTTVDGNGNWSFTPNTPLANGTVVNAVAQDPAGNTGPQGST
TVDSIAPAAPVVNPSNGAVLNGTAEPNSTVTLTDGSGNPIGEATADGSGNWTFTPGTQLP
DGTVVNATVTDAAGNTGAPGSTTVDASLPSIPQVDPSNGSVISGTADANNTIILTDGSGN
PIGQVSADGSGNWSFTPGVPLPDGTVVNVVARNPGGTDSAPAIITVDGVAPAAPVVEPSN
GTEISGTAEAGATVILTDGGGNPIGQTTADGSGNWSFTPGTPLANGTVINAVAQDPAGNT
SGPASVTVDAIAPAAPIINPSNGVVISGTAEAGAKVILTNSSGNPIGETTADGSGNWAFT
PAPALANGTVINAVAQDPSGNTSGPTSTTVDTIAPAAPIINPSNGVVISGTAEIGAKVIL
TDGSGNPIGQATADGSGNWSFTPGTPLANGTVINAVAQDAAGNTSAPQVSTTVDAIAPGQ
PTIEPSNGTEISGTAEAGAKVILTDGSGNPIGETTADGSGNWSFTPGTPLANGTVINAVA
QDPAGNTSGPASVTVDAIAPAAPIINPSNGVVISGTAEAGAKVILTNSSGNPIGETTADG
SGDWSFTPTTPLPNGTVVNAVAEDAAGNTSGPASTTVDTVAPSAPLLSISADGALLSGTA
EPNSQVRLVIDGDTANPITVNVDGSGNFSLPFAPPLITGELISGVTADAAGNLSGPSTIN
APDLAPPTISVPEAADTWINAAEISNGIQVDVTIRPTMQAGQVITVAFAGQNGYETQATH
TITAGDILAGSVTVTIPPGGGMGPFPEGASTVTADINGGTTSSAVPFTVDTIPPATPVLS
LVGSILTISTDPGTDLTVEVDIGGVTATATVTADNSGLASLNLLTDLDIDLTLDQLLNAQ
VSVTGEDPAGNTSNVATIGVGSSIEQPVTIGNFGLDVSLNPLSPRFGFSGTTEPDSSVVI
RVITPALNVELQPITADSSGDFSLNLLSPSVLTQLGLNITDILTLGSQISFNIVATDTNG
NDSSAYGITLTPNGLSLNLGQIDVNGTSGDDVMSGADGSSEHINAGDGNDLIFDVGTGDH
VVAGNGNDAIQITATNFVSIDGGAGFDTLVLADGIDLDYNAVGVGTLSNIERIDLGRGDS
GSVLTLTAAEVDAITDANNVLQITGESNDTLNVVGAVNTGTTQQLNGITYDVYNFGSSTL
LIEDNTVQVVV
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaggccaaggtgtctcccctcgctcaaagtgttacttctgccgctcccatt
gcaatccccgacaacggaatcctgacacttacccagagcagtaacattgttcttgatatt
gctccagaaagtgtgaccggctacgagaaaagtggcgccgacctgatcgtgcaactgaag
tcgggcgaaagcttgcgtatagccaacttctatgccgaagggcagcctgcaagccagttg
tatctggtagaccgggacaaactgctggccgtcgacctgcctccggtcgctgccgatggg
ccgctggtggcgggttatgtgcctcaggaaactccggctgggttcgagtcgctcaccggc
accgatggcaccgttgccgggctcagccctggtggtgcacttctggctggcgccgcgatc
attggtggcggcgtcgcgattgccaacagcaacggcggtggcggtggcggtggcggcggt
gacagcagtgtgcagcctgacaccacggccccggcgcccgccagcggattgcagattgcc
ccggatggcagcagcatcagcggcacggccgagccaggcgccaccgtgggcatcgacagc
aacggcgacgggcaaaccgacgttagcgtggtggtcggctccgacggcaaattccagatt
ccgctggatccgccactgaccaacggagaaacggtttccgtggtggtgaccgatccggcc
ggcaatagcagcccgcccgcgaccgtgcaggcccccgacttccccgatgcgccgcaaatc
aacccgagcaacggctccagcctcagcggtaccgcccagccgggcagcaccgtggtgctc
accgacggcaatggcaaccccattggtcagactaccgtcgacagcaatggcaactggtcg
tacacccccgacagcccactgcccgatggcacggtaatcaatgcggtggtcgtggatgcc
gccggtaacagcggcccgcccgccagcaccatcatcgatggcgtggcgccagcggcaccg
ttgatcaacccgagcaatggtaccgagctcagcggtaccgctgagccgaacagcaccgtg
accctcaccgatggcgatggtaatccgatcggccaggtgacggccgatggcagtggcaac
tggacctacaccccgggcacgccaatcgctgatggcacagtgatcaacgtggtcgcccag
gatgcagccggcaacaccagcgctccgacgagcacaacagtggatgcgcaggccccggcc
gcaccagtggtcaaccccagcaatggcaccacgatcagtggcaccgcagagccgggcagc
accgtcaccctgaccgatggcagcggcaaccctataggccaggtcaccgccgacggcagc
ggcaactggagtttcacaccgggcagcccgttacccaacggctccgtggtgaatgccacc
gcgaccgacccgaccggcaataccagcgctccatcgagcactacagtggatacggtggcc
ccggccgcaccggtgatcgagccgagcaacggtagcgaaatcagcggcaccgccgagccc
agcagcaccatcaccctgaccgacggcagcggcaatccgatcggccagactaccgccgac
ggcagtggcaactggtcgttcacgccaggcacaccgttgccggatggcacggtggtcaac
gccacggcgaccgacccggccggcaataccggcgggcagggcagcaccaccgtagatggc
gtggcaccagctgtacccaccatcaacctcagcaacggcagtagccttagcggtaccgcc
gagccgaacagcaccgtcaccctcaccgatggtagcggtaacccgattggcgaagccacc
gccgacggcagcggcaactggactttcacgccagccacgccgctgcccaatggcaccgtg
gtcaatgccacggctagcgacgcggctggcaataccggcccggcagctacggtcaccgtc
gactccagcgcgccggctgcaccggtaatcaatccaagcaacggcgcgagcatcagcggt
accgccgaagcgggcgccaccgtcaccctgaccgatggcagcggcaaccctataggccag
gtcaccgccgacggcagcggcaactggagtttcacaccgggcagcccgttacccaacggc
tccgtggtgaatgccaccgcgaccgacccgaccggcaacaccagcgctccatcgagcacc
acagtggatacggtggccccggccgcacccgtggtcgagccgagcaacggcagcgaaatc
agcggcaccgccgaaccaggcagcaccatcaccctgaccgacggcagcggcaacccgatc
gggcagactaccgccgacggcagcggcaactggtcgttcacaccaggcacaccgttgccg
gatggcactgtggtcaacgccacggcgaccgacccggccggcaataccggcgggcagggc
agcaccaccgtggacggcgtggccccgggtatacccaccgtcaacctcagcaacggcagc
agcctcagtggtactgccgagccgaacagcaccgtgaccctcaccgatggcagtggcaat
ccgattggcgaagccaccgctgacggcagcggcaactggacgttcacgccagccacgccg
ctgcccaatggcaccatggtcaacgccacggcgagcgacgcggctggcaataccggcccg
gcagcgacggtcaccgtcgactccagcgcgccggctgcaccggtaatcaacccaagtaac
ggcacgaccatcagcggtaccgccgaagcgggcgccaccgtgaccctgaccgatggcagc
ggcaacccgatcggccaggtcaccgccgacggcagcggcaactggagtttcacaccgggc
agcccgttacccaacggcaccgtggtgaatgccaccgcgaccgacccgaccggcaacacc
agcgctccatcgagcaccacagtggatacggtggccccggccgcgccggtggtcgagccg
agcaacggcagtgaaatcagcggcaccgccgagcccggcagcaccatcaccctgaccgac
ggcagcggcaacccgatcggccaggtcaccgctgacggcagcggcaactggtcgttcacg
ccaggcacaccgctgccggatggcactgtggtcaacgccactgcgaccgacccggccggc
aatatcggcgggcagggcagcaccaccgtagacggcgtggcgccagctgtacccaccatc
aacctcagcaacggcagtagccttagtggtaccgccgagccgaacagcaccgtcaccctc
accgatggcagcggtaacccgattggcgaagccaccgccgacggcagcggcaactggacg
ttcacgccagccacgccactgcccaatggcaccgtggtcaatgccacggcgagcgacgcg
gctggcaataccggcccggcagcgacggtcaccgtcgactccagcgcgccggctgcaccg
gtaatcaacccaagtaacggctcgaccatcagcggcaccgccgaagcgggcgccaccgtg
accctgaccgacggaagcggcaacccgattgggcagatcaccgccgacggcagcggcaac
tggagcttcacccccggttcgccgctggccaacggtaccgtgatcatcgccacggcaacc
gacccgaccggcaacactggtccgcaggccgccaccacggtggattcagtggccccggcc
gcgccggtggtcgagccgagcaacggtaacgaaatcaacggcaccgccgagcccggcagc
accatcaccttgaccgacggcagcggcaatccgatcggccaggctactgctgacggcagc
ggcaactggtcgttcacaccaggcacaccgttgccggatggcactgtggtcaacgccacg
gcgaccgacccggccggtaataccggcgggcagggcagcaccaccgtggacggcgtggcc
ccgggtatacccaccgtcaacctcagcaacggcagcagcctcagcggtactgccgagccg
aacagcaccgtcaacctcaccgacggcagtggcaatccgattggcgaagccaccgccgac
ggcagcggcaactggacgttcacgccagccacgccactgcccaatggcaccgtggtcaac
gccacggcgagcgacgcggctggcaataccggcccggcagcgacggtcaccgtcgactcc
agcgcgccggctgcaccggttatcaatccaagcaacggcgcgaccatcagcggtaccgcc
gagccgggcgccaccgtgaccctgaccgacttcggcggcaacccgatcggccagatcacc
gccgacggcagcggcaactggagcttcacccccggttcgccgctggccaacggtaccgtg
atcatcgccacggcaaccgacccgaccggcaataccggtccgcaggccgccactacggtg
gattcagtggccccggccgcaccggtggttgagccgagcaacggcagcgaaatcagcggc
accgccgagcccggcagcagagtgatcctgaccgatggcagcggtaaccccatcggccag
actactgtcgacggcaacggcaactggagcttcactcccaatacgccgctggccaatggc
acagtagtcaacgccgtggcccaagacccggccggcaacactggcccgcagggcagcacc
acggtggattcgatcgcacccgccgcgccggtggtcaatccgagcaacggcgccgtgctc
aacggtactgccgagccgaacagcaccgtgacccttaccgacggcagcggtaatcccatt
ggcgaagccaccgccgacggcagcggcaactggacgttcacccccggtacgcaactgccc
gatggcaccgtggtcaacgctaccgtgaccgatgccgccggcaataccggcgctcctggt
agcactaccgtggacgcgtcgctgccgtcgattccgcaggtcgacccgagtaacggctcg
gtgatcagcggtaccgcggatgcgaataacaccattatcctgaccgatggaagcggcaac
ccgatcggccaggtcagcgccgatggcagcggcaactggtcgttcacgcccggcgtaccg
ctgccggatggcaccgtggtcaacgtggtggcacgcaaccccggtgggaccgatagtgca
ccagcgatcattaccgtggatggcgtggcaccggccgcaccggtggtcgaaccgagcaac
ggcacggaaatcagcggtaccgccgaagcgggcgcgactgtcatcctcaccgacggcggt
ggcaacccgataggtcagaccaccgccgacggcagcggcaactggtcgttcacccccggt
acaccgctggcaaacggcacagtcatcaacgccgtggcccaggacccggccggcaacacc
agcgggccggccagcgtcaccgttgacgccatcgccccggccgcaccgatcatcaacccg
agcaacggggtggtgatcagtggtaccgccgaagccggggccaaggtgattctcaccaac
agtagcggcaacccgatcggcgagacgaccgccgatggcagcggcaactgggccttcacg
cctgcgcctgcgctggccaacggtacggtgatcaacgccgtggcccaggacccgtccggc
aataccagcgggccgaccagcaccaccgttgacaccatcgccccggccgccccgatcatc
aacccgagcaacggagtggtgatcagtggtaccgcagaaattggcgccaaggtgatcctc
accgacggcagcggcaacccgattggccaggctaccgcggacggcagcggtaactggtcg
ttcacgcctggcacaccgctggccaacggcacggtgatcaacgccgtggctcaggacgcc
gccggcaataccagcgccccacaggtcagcaccaccgtggatgcgatcgcccccggccag
ccgacgatcgagccgagcaacggtaccgagatcagtggtaccgccgaagccggggccaag
gtgattctcaccgacggcagcggcaatccgatcggcgagacaaccgccgacggcagcggc
aactggtcgttcacgcccggtacaccgctggccaacggcacggtcatcaacgccgtggcc
caggacccggccggcaacaccagcgggccggccagcgtcaccgttgacgccatcgccccg
gccgcaccgatcatcaacccgagcaacggggtggtgatcagtggtaccgccgaagccggg
gccaaggtgattctcaccaacagtagcggcaacccgatcggcgagacgacggcggacggc
agtggcgactggagcttcaccccaaccacgccgctgcccaatggcacggtggtcaacgcg
gtggccgaggacgccgcaggtaacaccagtggcccggccagtaccacggtcgacacggtg
gcgccgtcggcgccgctgctgagcatcagtgccgacggtgcgctgctgagcggtaccgcc
gagccgaacagccaggtacgtctcgtgatcgacggcgataccgccaacccgatcacggtg
aatgtcgatggcagcggcaacttcagcctgccgtttgcgccgccgctgatcaccggcgag
ctgatcagcggggtcaccgccgatgctgccggcaacctcagcggcccatcgacgatcaac
gcgccggacctggcaccgccgaccatcagcgtgccggaggccgccgatacctggatcaac
gctgccgagatcagcaacgggatccaggtcgacgtgaccatccgcccgaccatgcaggcc
ggccaagtgatcacggtcgccttcgccgggcagaacggctacgagacgcaggcaacgcac
accatcaccgccggcgatatcctggccggcagtgtcaccgtgaccattccccctggcggt
ggcatggggccgttccccgagggggcctcaaccgtcaccgcggacatcaatggcggtact
acgtcgagcgcggtgccattcaccgtcgacaccatcccgcctgcgaccccggtgctgtcg
ctggtgggcagcatcctgaccatctccaccgacccgggaaccgacctgacggtcgaagtg
gacatcggcggcgtcaccgccaccgccacggtgactgccgataatagcgggctggcttct
ttgaacctgctcaccgacctggacatcgacctcaccctggaccagttgctcaatgcccag
gtttcggtgactggcgaggatccggctggtaacacgagcaatgtggccaccatcggcgtc
ggcagcagcatcgagcagccagtgaccatcggcaacttcggcctcgatgtcagcctcaac
ccgctgagcccacggttcggtttcagcggcaccaccgagccggactccagcgtggtgatc
cgtgtcatcaccccggcgctgaacgtcgagctgcagccgatcacagcggacagctccggc
gacttctcgctgaacctgctgagcccgagcgtgctcacccagttggggttgaacatcacc
gatatcctcaccctcggttcgcagatctcgttcaatatcgtcgccaccgataccaacggc
aacgacagttcggcctacggcatcaccctgaccccgaacgggctgtcgctgaacctgggc
cagatcgacgtcaacggtacctccggggacgatgtgatgtccggggcggacggcagttcg
gagcacatcaacgccggcgatggcaatgatctgatcttcgatgtggggactggcgaccac
gtggtggccgggaacggcaacgatgccatccagatcaccgcgaccaacttcgtcagcatc
gacggcggcgcgggcttcgacactttggtcctggccgacggcatcgacctcgactacaac
gccgtcggcgtcggcacgctctccaatatcgagcgtatcgacctcggcaggggcgactct
gggagcgtgctgaccctgaccgcggcggaggtcgacgccatcaccgatgccaacaacgtc
ctgcagatcaccggcgagagcaacgacacgctcaacgtggtgggtgccgtgaacacaggg
accacccagcagctcaacggcattacctacgatgtctacaactttggcagcagtaccctg
ctgatcgaggacaacacggtacaggtcgtggtctga
DBGET
integrated database retrieval system
