Pseudomonas inefficax: RIN61_25935
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Entry
RIN61_25935 CDS
T09811
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_25935
Enzymes [BR:
pix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RIN61_25935
DNA repair and recombination proteins [BR:
pix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RIN61_25935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WNN42374
LinkDB
All DBs
Position
complement(5750868..5752394)
Genome browser
AA seq
508 aa
AA seq
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MRLGLVLGDQLSFDLASLAALDPARDAVLMAEVQEEARYVPHHPLKIVLIFSAMRHFAQA
LRERGWRVHYVELDADGNSGSIVGELQRWHHALGATHIHLTECGEWRLEQALRDAALPLV
WHRDTRFLCSREAFARWARERRQLRMEHFYRGMRKRTGLLMETDGRPAGGAWNFDGDNRK
ALPRKLRGPFAAHFAQDGITAAVVALVRQRFRDHYGAIDGFDYPVTHAEAQQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRCLCNEVDQAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWLRMPAYAGLNHLGNERALPAFYWTGRTRMRCMEQAIGQTLRLGYA
HHIQRLMVTGNFALLAGVVPSAICEWYLAVYMDAFDWVELPNTLGMVMHADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQLVEENACPFNALYWHFLIRHRTLLSANPRLALVYRSL
DSMSASRRDAVWQRGQSLLALLDAAQEV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcctggtgctgggtgaccagctgtcgttcgacctggcaagcctggccgct
ctcgaccctgcccgcgatgcggtgctgatggcggaagttcaggaggaagcccggtatgtg
ccgcatcatccgctgaagatcgtactgatattcagcgccatgcgtcacttcgcccaggca
ctgcgtgagcgcggttggcgagtgcattatgtggagctcgacgctgacggcaacagcggt
agcatcgttggcgaattgcagcgctggcatcacgccttgggggccacgcacatccacctc
accgagtgcggtgagtggcgcctggagcaggcgttgcgcgatgctgcattaccgcttgta
tggcatcgggacacacgttttctgtgctctcgcgaagccttcgcgcgctgggctcgggag
cgtcgccagctgcgtatggagcacttctaccgtggcatgcgcaagcgaaccggcctgctt
atggaaactgacggccggccggcgggtggcgcctggaattttgatggcgacaatcgcaag
gcgttaccccgcaagctgcgtgggccgtttgctgcgcatttcgcgcaggacgggatcacc
gcagcggtggtagccctggtgcgccagcgctttcgcgaccactacggggccatcgacggc
ttcgactaccccgtgacgcatgccgaggcgcaacaactctggcagcattttctggatttc
ggcctggcggcttttggtgactaccaggacgcgatggcggagggcgagccgtatctgttc
catgcgcgtatcagtgcggcactcaatatcggccttctggacgtgcgttgtctgtgcaat
gaggtcgaccaggcctggcgcgaggggcgggtgccgctcaatgctgcggagggcttcatc
cgccagttgatcggctggcgcgagtatgtgcgaggcatctattggttgcgcatgccggcg
tacgccgggctcaatcatctgggcaacgagcgggcgttgccggcgttctactggaccggg
cgcacccgcatgcgctgcatggaacaagccatcggacagaccctgcgactgggctatgcg
caccatatccagcgactgatggttaccggcaacttcgccttgctcgccggcgtcgtgcct
tcggcgatttgcgagtggtacctggcggtgtacatggatgccttcgactgggtcgagttg
cccaacacgcttggcatggtgatgcacgccgatggcggctatctgggctccaaaccctat
tgcgccagtggtcgttacatccagcgcatgtccgatcactgcaaggcttgcagttacagg
gtcgatcagctggtcgaggagaatgcctgcccgttcaatgccttgtactggcattttctc
attcgccatcgcaccctgctttcggccaacccgcgtctggcgctggtctatcgtagtctc
gacagcatgtcggccagccgtcgcgatgcggtatggcagcgtggccagtcacttctggca
ctgctcgatgcggcgcaggaggtataa
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