Pseudomonas inefficax: RIN61_26360
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Entry
RIN61_26360 CDS
T09811
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_26360
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RIN61_26360
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Peripla_BP_6
KR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WNN39665
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All DBs
Position
complement(5841987..5843006)
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AA seq
339 aa
AA seq
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MSRTGSRTTGRPTLAEVARLSGVSPITASRALRGVSTVAPALVEKVVAAAASLGYVANPA
ARALASARSQSVVVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRN
YLAYQPCGMLLTGFERSEASRQMLAASGVPCVHMMELNGEAGALSVGFSQQQAGRAAARH
LIERGRKRLAFIAAQLDPRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSALFSQ
LLQQAPDVDGIFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRT
PRAAVGRGAAQALLALLDGKRVPNAQQDLGFELMVRESS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaccggctcccgtaccacaggtcgtcccaccctggcagaagtcgccaggctt
tccggggtttccccgattaccgcctcgcgcgccctgcgtggggtgagcacggttgcgccg
gcgctggtggaaaaggtcgttgctgccgcggccagcctcggctatgtggccaacccggca
gctcgcgccctggcgtcggcgcgcagccagtcggtggtggtattgatcccgtcgctgtcc
aaccagttgttcatcgacaccctggaagccattcatgaggtcatgcgcccacgcgggctc
gaggtgctgattggcaactatcactacgatcttgccgaagaagagaacctcatccgcaat
tacctggcctaccagccctgcggcatgctgttgaccggtttcgagcgcagcgaggcatcg
cggcagatgctggcggccagtggcgtaccctgtgtgcacatgatggaactgaatggcgag
gccggggcgttgtcggtcggcttctcgcagcagcaggccgggcgtgccgcggcccgccac
ctgatcgagcgcgggcgcaagcgcctggcgttcattgccgcccagctcgaccctcgggtg
atgcagcgtgccgaagggttccgccaggcgttggccgaggccggcttgcaggcggccgag
ctggaagtgctggcgccggagccgtcttcgattgccttgggcagcgcgttgttcagccag
ctgttgcagcaggcgccggatgtggacggtatcttcttctgcaacgacgacctggcccag
ggcgcggtgctgcaggcattgcgccaaggggtggaggtgcctcggcaggtggcgatggtc
ggtttcaacgacctgccagcttcggcgcacatggtgccgcggctgacctcgattcgcacg
cctcgggccgccgtagggcgcggtgcggcgcaggcgctgctggcgttgctcgatggcaag
cgggtaccgaatgcgcagcaggacctgggcttcgagttgatggtgcgggagagttcctga
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integrated database retrieval system
