Pseudomonas izuensis: LAB08_R00140
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Entry
LAB08_R00140 CDS
T08555
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
piz03009
]
LAB08_R00140 (rsmB)
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LAB08_R00140 (rsmB)
Ribosome biogenesis [BR:
piz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LAB08_R00140 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
PCMT
MTS
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BCX65419
UniProt:
A0ABM7RFH6
LinkDB
All DBs
Position
complement(14669..15979)
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AA seq
436 aa
AA seq
DB search
MNPRLAAAKALAAVLNGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAK
LLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALLNAVLRR
AQRESEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICTANNAHPPMILRVNRRHQ
TRDAYLELLSQAGITAQPCVYSRDGIILDAAADVRSLPGFAEGWISVQDEAAQLAADLLD
LAPGQRVLDACCAPGGKTCHILEAEPKLAGVVAVDLEAKRLVRVRENLERLGLSAELIAA
DGRDTQAWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALALLQGELLDAMWN
TLEVGGILLYATCSTLPTENTEVIEAFLARTPGARELDLATAAGIKQPHGRQLLAQEGGH
DGFYYAKLIKIAAARG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgtctggccgccgccaaggcactggctgctgttcttaacggaaaagcctcg
ctcaacagttcactgccgacgcaactggacaaggtagaggaccgcgaccgaggtttcacc
caggacctggcgttcggcaccgcacgctggcaaccacgcttgtcggcgctggcggccaag
ctgctgcagaagccgttcaaggccgccgacgccgatgtcgaagcgctgctgctggtcggc
ctctaccaactgctctatacccgcgttccggcgcacgccgccatcggggaaaccgtcggt
tgcgccgacaagctgaaaaagccctgggccaaagccttgctcaatgccgtgctgcgccgc
gcccaacgggaaagcgaagcgctgctggcagagctggaacacgacccggtggtacgcact
gcccacccgcgctggctgcaaaaatccctgaaagccttctggcccgagcagtgggaagcc
atttgcacggcgaacaacgcgcacccgccaatgattctgcgggtcaaccgccgccatcaa
acgcgcgatgcctatctggagctgctgagccaggccggcattaccgcccaaccgtgcgtt
tacagccgcgacggtatcatcctcgacgccgccgccgacgtacgcagcctgccgggtttc
gccgaaggctggatcagtgtgcaggacgaagcggcgcaactggcggccgatctgctcgac
ctggcgccgggccagcgggtgctggacgcctgctgcgcgccgggcggcaagacctgccac
atcctcgaagccgagccaaaactggccggcgtggtggcggtggacctggaagccaagcgt
ctggtgcgggtacgggaaaacctcgaacgcctcggcctgagtgccgaactgatcgccgcc
gacggccgcgacactcaagcgtggtgggacggcaagccattccagcgcattctactggac
gcaccgtgctcggccaccggggtaattcgtcgccatccggacatcaagctgacccgccaa
ccggatgacattgccgcactggcgctgctgcaaggcgaattgctcgacgccatgtggaat
accctggaggtcggcggcatcttgctctacgcgacatgctcgacattgccgaccgagaac
accgaagtgatcgaagcgttcctcgcccgcacaccgggtgcccgtgagctggacctggcg
accgcggccggtatcaagcaaccccatggacgccaattgctggcacaggaaggcggccat
gacggcttctattacgccaagctgatcaagatcgccgccgcgcgcggttaa
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