Pseudomonas izuensis: LAB08_R00440
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Entry
LAB08_R00440 CDS
T08555
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
piz
Pseudomonas izuensis
Pathway
piz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAB08_R00440 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
piz02022
]
LAB08_R00440 (algB)
Two-component system [BR:
piz02022
]
NtrC family
KinB-AlgB (alginate production)
LAB08_R00440 (algB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
VpsR
cREC_REC
AAA
Mg_chelatase
AAA_2
AAA_22
AAA_19
HTH_23
MCM
Xre-like-HTH
HTH_29
HTH_50
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BCX65449
LinkDB
All DBs
Position
45837..47183
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AA seq
448 aa
AA seq
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MESATEHQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPQDGLDSHSPAMKVVLETARQVASTDANILILGESGTG
KGELSQAIHGWSKRAKKSCITINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLVLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNQNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERREDILTLADRFLARFVKEYARPARGFSDEAREALLSYRW
PGNIRELRNVVERASIICPQERVEISHLGMAETPVNNAPRIGAALSLDELEKAHIGAVLA
TAGTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgccactgagcatcaaggccgcattcttctggtggatgatgagtccgccatc
ctgcgtaccttccgttattgcctcgaggatgaaggctacagcgtggcaaccgccaacagc
gctgcccaagccgatgcgttgctgcaacgtcaggtgttcgacctgtgcttcctcgattta
cgcctgggtgaggacaacggcctcgatgtgttggctcagatgcgcattcaagcgccctgg
atgcgcgtggtgatcgtcaccgcgcactcggcggtggacactgccgtcgatgccatacag
gccggtgctgccgattacctggtcaagccgtgcagccccgatcagttgcgtctggccact
gccaagcagttggaagtgcggcaattgtcggcgcgcctggaagccctggaaggcgaagtg
cgcaaaccccaggatggcctggactcccatagtccggccatgaaggtggtgctcgagacg
gcccgccaggtcgccagcaccgatgccaatatcttgatactcggcgagtccggcaccggt
aaaggcgagctgtcacaggcgattcatggctggagcaagcgggcgaaaaagtcctgcatt
accatcaactgtccatcgctgaccgccgagctcatggaaagtgaactgttcggccacagt
cgcggagcgttcaccggagccagtgaaagcaccttgggtcgtgtcaatcaggctgatggc
ggtacgctgtttctcgatgaaatcggcgattttcccttggttttgcaacccaagttgctg
cgtttcattcaggataaagaatacgaacgcgtgggtgacccggtcacccgtcgcgctgat
gtacgcatcctcgcagccaccaaccagaacctcgaagatatggtccgcgatggccgtttt
cgtgaagacctgctctatcgcctgaacgtcatcaccttgcacctgccgccgttacgcgag
cgcagggaagacattctcacccttgccgaccgctttctggcgcgctttgtcaaagagtac
gcacgcccggcccgggggttcagcgacgaggcccgcgaagcgctgttgagttatcgctgg
ccggggaacattcgcgaactgcgcaacgtggtggagcgggcgagcattatttgcccgcag
gagcgggtcgagatcagtcacttgggcatggccgagacgccggtcaacaatgcgccgcgc
attggcgcggccttgagcctggatgaactggagaaagcccatatcggcgccgtcctcgcc
accgcaggcactctggatcaagccgccaagaccctgggtatcgacgcttcgactctgtac
cgcaaacgtaaacagtacaacttgtga
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