Pseudomonas izuensis: LAB08_R01770
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Entry
LAB08_R01770 CDS
T08555
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00250
Alanine, aspartate and glutamate metabolism
piz00310
Lysine degradation
piz00350
Tyrosine metabolism
piz00650
Butanoate metabolism
piz00760
Nicotinate and nicotinamide metabolism
piz01100
Metabolic pathways
piz01120
Microbial metabolism in diverse environments
Module
piz_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LAB08_R01770 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LAB08_R01770 (gabD)
00310 Lysine degradation
LAB08_R01770 (gabD)
00350 Tyrosine metabolism
LAB08_R01770 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LAB08_R01770 (gabD)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LAB08_R01770 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LAB08_R01770 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LAB08_R01770 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BCX65574
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Position
192215..193657
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFINGEWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERATKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGTELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDG
VYDAFAEKLKVAVAKLKIGNGLEAGTTTGPLIDEKAVAKVQEHIADALSKGATVLAGGKP
MEGNFFEPTILTNVPNNAAVAKEETFGPLAPLFRFKDEADVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagcctttattaatggcgagtgggtc
gatgccgacaatggtcagacgatcaaggtcaacaacccggcaacgggcgaaattctgggc
accgtgccgaagatgggcgctgccgaaacccgccgtgccatcgaagccgctgacaaggcg
ctgccggcctggcgtgcactgaccgccaaagaacgtgcgaccaagctgcgtcgctggttc
gaactgatgatcgagaaccaggacgacctggctcgcctgatgaccctggaacaaggcaag
ccattggccgaagccaagggtgaaatcgtttacgccgcttccttcatcgagtggttcgcc
gaagaagccaagcgcatctacggtgacgtgattccgggccaccagccagacaagcgcctg
atcgtgatcaagcagccaatcggcgtgaccgctgcaatcaccccgtggaacttcccggcc
gccatgatcacccgtaaagccggcccggccctggctgccggttgcaccatggtgctcaag
cctgcttcgcaaaccccattctcggctttcgccctggccgagctggcccagcgtgccggc
atcccggctggcgtgttcagcgttgtttccggcagcgccggcgacatcggtaccgagctg
accagcaacccgatcgtgcgcaagctgtccttcaccggttcgactgaaatcggtcgtcaa
ctgatggccgaatgcgccaaggacatcaagaaagtgtccctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgccgacctggataaggccgtcgaaggcgcgatcatttcc
aaataccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacattcaggacggt
gtctacgacgcattcgccgagaagctgaaagtggccgtcgccaagctgaagatcggtaac
ggtctggaagccggtaccaccactggcccgctgatcgacgaaaaagccgtggccaaggtg
caagagcacatcgccgacgccctgagcaaaggcgcgaccgtactggccggtggcaagccg
atggaaggcaacttcttcgagccgaccatcctgaccaacgtgccgaacaacgctgccgtg
gccaaggaagaaaccttcggtccattggcgccactgttccgcttcaaagacgaagccgac
gtgatcgcgatgtccaacgacaccgagttcggtctggcctcgtacttctatgctcgcgac
ctgggccgtgtgttccgtgtggctgaagccctggaatacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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