KEGG   Pseudomonas izuensis: LAB08_R02520
Entry
LAB08_R02520      CDS       T08555                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
piz  Pseudomonas izuensis
Pathway
piz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:piz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LAB08_R02520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:piz02022]
    LAB08_R02520
Two-component system [BR:piz02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LAB08_R02520
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 HTH_8 FleQ AAA HTH_Tnp_ISL3 AAA_16 DUF6716 HTH_23
Other DBs
NCBI-ProteinID: BCX65649
LinkDB
Position
complement(274513..275907)
AA seq 464 aa
MTIDNRIQVVLIDDDPHLRQALGQTLDLAGLKILPLAEAKGLAAQLERDWPGVVVSDIRM
PGMDGLELLTELHAQDPDLPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALALRRLVLDNRSLRLALSDRNELSARLVGQSPSMLRLREQIGALAATKADVLILGETGA
GKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALVLFQHFADEASARHGLPPHELQPGQRALLLRHT
WPGNVRELQNAAERFALGLELALDNSEVQSAAGIGVDMVSGGLSEQVENFEKTLIAAELA
RSHSSVRSVAEALGIPRKTLHDKLRKHGLSFADSGAASHTDELD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaccatcgacaatcgcatccaggttgtgttgatcgacgacgatccccacttgcgtcag
gccctggggcagaccctcgatctggctggcctgaaaattctgccgttggccgaagccaag
ggcctcgccgcacaactggaacgtgattggccaggggtggtggtcagcgacattcgcatg
cccggcatggacggtctcgaacttctgacggaactccacgctcaagacccggatctgccg
gtgttgctgatcaccggtcacggcgatgtgccgttggcggtgcaagccatgcgcgcgggc
gcttatgactttctggaaaaacccttcgccagcgatgccctgctcgacagcgttcgtcgc
gccctggccttgcgccgattggtattggataaccgcagcctgcgcctggccctgagtgat
cgcaatgagttgagcgcccgactggtcgggcaatcgccatcgatgctgcgcctgcgcgaa
caaatcggtgccttggcggcgaccaaggccgatgtgttgatcctcggtgaaaccggcgcc
ggcaaagaagtagtggcgcgggcgctgcatgatttgtcgagccgccgcaacggtccgttc
gtggcgatcaacgccggggcgctggccgagtcggtggtcgagagcgagctgttcggtcat
gagccgggcgccttcacgggcgcgcagaagcgacgcatcggcaagttcgaattcgccaac
ggcggcacactgttcctcgatgaaatcgaaagcatgagcctggacgtgcaagtgaagctg
ctgcgtttgctgcaagagcgggtggttgaacgcctgggcggcaatcagttgatcccgctg
gacatccgcatcattgccgcgaccaaggaagacctgcgccaggctgctgatcaggggcgt
ttccgcgccgacttgtactaccggctgaacgtcgcgccactgcgcattccaccgttgcgt
gaacgaggcgaagatgcgctggtgctgttccagcattttgccgatgaggccagtgcccgc
cacggcttgccaccccatgaattgcaaccgggccaacgtgccctgctgctgcgccacacc
tggcccggcaacgtgcgcgaactgcaaaacgccgccgaacgctttgccctcggcctggaa
ctggcgctggacaacagcgaggtgcaaagtgccgccggcatcggggtggacatggtcagc
ggcggactgagcgagcaagtggaaaacttcgaaaaaaccctgattgccgccgaactggca
cgctcccacagctcggtgcgcagcgtcgccgaagccctgggcattccacgcaagaccttg
cacgacaaattgcgcaaacacggcctgagcttcgccgacagcggtgccgccagccacact
gacgaactcgattaa

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