Pseudomonas izuensis: LAB08_R03640
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Entry
LAB08_R03640 CDS
T08555
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAB08_R03640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R03640
Enzymes [BR:
piz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAB08_R03640
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAB08_R03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
HypA
iSirtuin
AAA_19
DUF4796_N
RUBY_RBDX
TrwB_AAD_bind
nSTAND3
Zn_ribbon_6
PIF1
AAA_22
Zeta_toxin
AAA_16
ADDB_N
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
BCX65759
LinkDB
All DBs
Position
complement(397299..399518)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVVRARLHPGMRLRVPFGRREMIGILVEVADTSEVP
AEKLKRALALLDATPPLPPALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSAAPGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKELVQ
VEVRKHAPGARHEHWLAQPELPLNPEQRAAYEAIRAGFDSYHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALIHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMRNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECQRCDARMTVHQRHGELRCHHCGYVERVPRQC
PKCNKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAEQHLTGIELLGPVPAPMERRAGRYRAQLLLQATARAPLHRLLASWLLVLEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattctgcgcctcgccctgccttcgcccctgcgccgcctgttcgactac
cgtgcgccggccggtgtagtgcgcgcccgactgcaccccggcatgcgcctgcgggtacct
tttggccggcgggagatgatcgggattctggtggaagtcgccgataccagcgaagtcccg
gcggaaaaactcaagcgggccctggcattgctcgacgccacgccaccgctgccaccggcg
ttgttcaagctgtgcctgtggacctcccagtattaccagcacagcctcggtgacaccctg
agctgggcactgccggtgttgctgcgccagggcgaactggccgaagcgcgccaggaacgt
ttctggtccgccgcccccggcgccagcctcgatgatccgcgtatcgcccgcgccccgcgc
cagcgagaagccctggcgacactggcccagcatccccacggtgtcgcccatcagttgctg
agcaaattgatgctgagcaaagacagccttgatctgttgctggccaaggaactggtgcaa
gtcgaagtccgcaagcacgctcccggcgcgcgccatgaacactggctggcccaaccggag
ttgccgctcaacccggagcagcgtgcagcttatgaggccattcgcgccggcttcgacagc
tatcacgcgttcctgctggccggtgtcaccggcagcggcaagaccgaagtgtatttgcaa
ttgatccgcgaaacccttgaagccggcaaacaggcgctggtgctgatcccggaaatcaac
ctgggcccgcaaaccctggcgcgcttcgaacaacgcttcaatgcgcgcatcgcgctgatt
cactcggcagtcaatgatcgcgaacgtctcgatgcctggctcgccgcccgcgacggtgag
gccgacatcattatcggcacccgctcggcgctgttcacgccgatgagaaatccgggactg
atcatcatcgatgaagagcacgacggctcatataagcagcaggaaggcctgcgctatcac
gctcgcgatctcgcactggtgcgcgcccgacaggaaaacattccgattgtgctcggttcg
gccacaccctctctggaaagcctgcacaatgcctacaccggccgttacggcctgctacgc
ctgaatgagcgcgccggcggcgccaaacaaccgcgtttcctacgccttgacgtgaaaagc
cgcccgctggacagcggcatttccgggccgatgcaacaagccatcggccagaccctggcg
gctggccagcaagtattggtattccttaaccgccgtggtttcgccccgaccctgctctgc
catgactgcggctggatgtctgaatgccagcgctgcgacgcgcgcatgaccgtgcatcag
cgccatggcgaactgcgttgccaccattgcggctatgtcgagcgcgtgccacgccagtgc
ccgaagtgcaacaaggtcgatttgcgtcctgtgggggccggcaccgaacgggccgaggag
cgcttgggcattctgttcccggactacccggtattgcgggtcgatcgcgacagtacgtca
cgcaaggacgcgatgaatcaattgttcgcgaccattcagaagggccagccatgcatcctg
gtgggcacgcaaatgctcgccaagggccaccactttccaagggtgactctggtgtcgatt
ctcgatgccgatggcggcctgttctccggtgatttccgcgccagcgagcgcatggcgcaa
ctgatcgtgcaggtcgccggacgcgccggccgggcggaagaaccgggcaaagtgatcatc
cagacgcacctggccgaccatccgctgctggtgcaattgaccgaacaaggctatttcgcc
tttgccgagcaagccttgagcgaacgtcgcgcagcgggtttgccgccgttcgcgcacctg
gcgctgttgcgggccgaagcgcacaaaccgggtcaggccgaaggcttcctcgatgaggcg
tgcagcgaggccgagcgtttgctggccgaacagcatctgaccggcattgaactcctgggc
ccggtgccggcgccgatggagcgccgggcaggacgctatcgtgcacagctattgttgcag
gctacagcccgggcgcctttgcatcggttgcttgccagttggttgctggtgctggagcag
atgccgagtgggcgggcggtgcgctggtctttggatgtcgatcccgtcgatttgtattga
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