Pseudomonas izuensis: LAB08_R04490
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Entry
LAB08_R04490 CDS
T08555
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00540
Lipopolysaccharide biosynthesis
piz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LAB08_R04490 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
piz01005
]
LAB08_R04490 (waaA)
Enzymes [BR:
piz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LAB08_R04490 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LAB08_R04490 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LAB08_R04490 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LAB08_R04490 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
piz01005
]
Lipid A
LAB08_R04490 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
BCX65844
LinkDB
All DBs
Position
507698..508975
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AA seq
425 aa
AA seq
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MNRTLYTALFYLGLPLVAIRLWLRARKAPAYAKRIGERFSYGMPAMKPGGIWVHAVSVGE
SIAAAPMIRALLQRYPALPITVTCMTPTGSERIQALFANEPRIQHCYLPYDLPCAAKRFL
DRVRPTLAVIMETELWPNHIHQCAKRGIPVALANARLSERSARGYGRFGKLTGPMLAEMS
LFAVQTEAEALRFRELGARVETVEVTGSIKFDLTIDPQLLQRAAELRGQWQAQDRPVWIA
ASTHEGEDEVVLAAHRRLLASHPDTLLILVPRHPERFNPVFELCRQQGFATVRRSSGEPV
SAATSVLLGDTMGELLFLYALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLE
IAGQLRSAGALQEVEDAEGLALAVQRLFELPRDAQRMAEAGLKVMRTNQGALQRLLDGLG
RLIDR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaactctctacaccgcgctgttttacctggggctgccattggtggcgattcgg
ctgtggctgcgggcgcgcaaggcgccggcttatgccaaacgtatcggcgagcgcttctcc
tacgggatgccggcgatgaagcccggtggtatctgggtgcacgcggtgtcggtaggcgaa
agtattgctgccgcgccgatgattcgcgccctgctgcaacgttatccggcgcttccgatc
accgtgacctgcatgacgccgaccgggtccgaacgtatccaggcattgtttgctaatgaa
ccgcgcatccagcactgctacctgccctacgacttgccgtgcgcggcaaagcgttttctt
gatcgggtccggccaacactggcggtgatcatggaaaccgaactgtggcccaaccatatc
catcaatgcgccaagcgcgggattcccgtggccctggccaatgcacgcctgtccgagcgc
tcggccaggggctatggacgcttcggtaaactgaccggaccgatgctcgccgagatgagc
ctgtttgcggtgcagaccgaggctgaagccctgcgttttcgtgagttgggcgcgcgggtt
gaaaccgtcgaggtcaccggctcgatcaagttcgacctgaccatcgacccgcaactgttg
cagcgtgccgccgagttgcgtgggcaatggcaagcgcaggatcgcccggtgtggatcgcc
gccagcacccatgagggcgaagacgaggtggtgctcgcggcccatcgccggttgctggcg
agccatcccgataccttgctgattctggtgccgcgccatccggagcgtttcaatccggtg
tttgagctgtgccggcagcaggggtttgccacggtccgtcgctccagcggcgagccggtc
agcgccgccacttcagtgctgctgggcgacaccatgggcgagttgctgttcctctatgcc
ctggctgacagcgcgttcgtcggcggcagcctggtgcccaatggcgggcataacctgctg
gaaccggcggcactggctaaaccggtgctcagtggtccgcacctgttcaacttcctcgaa
atcgccggacagctgcgcagcgccggggcgttgcaggaagtggaagacgcggaaggcctg
gcgttggcggtgcagcgcctgtttgagttgccgagggatgcgcagcgcatggcggaggcc
gggctgaaggtcatgcgcaccaatcagggcgcattgcagcgattgctcgacggattagga
cggttgatcgaccgttaa
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