Pseudomonas izuensis: LAB08_R05920
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Entry
LAB08_R05920 CDS
T08555
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00330
Arginine and proline metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
Module
piz_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LAB08_R05920 (speA)
Enzymes [BR:
piz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LAB08_R05920 (speA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
BCX65985
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Position
672651..674564
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AA seq
637 aa
AA seq
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MSVRRTRKDDGSQWTVADSRSVYGIRHWGAGYFAINDAGRVEVRPNGPSSSPIDLFEQVD
QLRKSGLSLPLLVRFPDILQDRVRQLTGAFDANIERLEYQSKYTALYPIKVNQQEAVIEN
IIATQNVSIGLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVI
EKESEVGLVIEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERF
RTAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDY
DGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVT
DVEKHNDDVPQIENKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVASQYADGKL
TLAEKALAEQCYFAVCRRLHNSLKARQRSHRQVLDELNDKLADKYICNFSVFQSLPDTWA
IDQVLPIIPLHRLDEEPLRRAVLQDLTCDSDGKINQYVDEQSIETSLPVHALNEGEDYLL
GVFLVGAYQEILGDMHNLFGDTDSVNIYQNADGSVYHAGIETHDTIEDMLRYVHLSPEEL
MTHYRDKCASARISATERTQFLDALRLGLTRSSYLSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgacgcacacgcaaagacgatggcagccaatggacagttgcggacagccgc
agtgtttacgggattcgccattggggggccgggtatttcgcgatcaatgacgccggtcgc
gtcgaagttcgtccgaacggcccgagcagttcgcccatcgacctcttcgagcaggtcgac
cagttgcgcaagagcggcctgtcgttgccgttgctggtgcgcttcccggatatcctgcaa
gaccgcgtgcgtcagttgaccggcgccttcgacgccaacatcgagcgcctggaataccag
agcaagtacaccgcgctgtacccgatcaaggtgaaccagcaggaagcggtgatcgagaac
atcatcgcgacccagaacgtgtccatcggcctggaggccggctccaagcctgaactgctg
gcggtgctggcactggcgccgaagggcggcaccatcgtctgcaacggctacaaggaccgc
gagttcatccgcctggcgctgatgggccagaaactcggccacaacgtgttcatcgtgatc
gagaaagagtccgaagtcgggctggtgatcgaagaggccgcctcgctcaaggtcaagcca
caggtcggcctgcgcgtgcgcctgtcgtccctggcatcgagcaagtgggccgacaccggt
ggcgagaaatccaagttcggtctgtcggcggcgcaactgctgtcggtggtcgagcgtttc
cgcaccgcgggcctggatcagggcatccgcctgctgcacttccacatgggctcgcagatc
gccaacctggcggactaccagcatggtttcaaggaagcgattcgctactacggcgaattg
cgcaacctcggcctgccggtggaccacatcgacgtcggcggcggtttgggcgtggactac
gacggcacgcactcgcgtaacgccagttcgatcaactacgacatggacgattacgccggt
gtcgtggtcgggatgctcaaggaattctgcgacgcgcagagcctgccgcacccgaacatc
ttctccgaaagcggccgttccctgaccgcccaccatgccatgctggtggtgcaggtgacc
gacgtcgagaaacacaacgacgacgtgccgcagatcgagaacaaggaagcattgccggaa
accgtgcagtggctggtcgacctgttggggccgaccgatatcgagatggtcaccgaaacc
tactggcgcgccacgcactacatgagcgatgtcgcctcccaatacgccgatggcaagctg
accctggccgaaaaagccctggccgagcaatgctatttcgccgtgtgccgtcgcctgcac
aactcgttgaaggcacgtcagcgttcccaccgtcaggtgctcgacgaactcaacgacaag
ctggccgacaagtacatctgcaacttctcggtgttccagagcctgccggacacctgggcc
atcgaccaggtactgccgatcatcccgctgcatcgccttgacgaagagccgctgcgccgt
gcggtgctgcaagacctgacctgtgactccgacggcaagatcaatcagtacgtcgacgag
cagagcatcgaaaccagcctgccggtgcacgcattgaatgagggtgaagactacctgctg
ggcgtgttcctggtcggtgcctatcaggaaatcctcggcgacatgcacaacctgttcggt
gacaccgactcggtgaacatctaccagaacgccgacggcagcgtgtaccacgcgggtatc
gaaacccacgacaccatcgaagacatgctgcgttatgtgcacttgtcgccggaagagctg
atgacccactaccgcgacaagtgcgccagtgcccgaatcagtgccaccgagcgcacccag
ttcctcgacgccttgcgtctgggcctgacccgatcgtcttacctgtcttcttga
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