Pseudomonas izuensis: LAB08_R06460
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Entry
LAB08_R06460 CDS
T08555
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAB08_R06460 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R06460 (recC)
Enzymes [BR:
piz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LAB08_R06460 (recC)
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAB08_R06460 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
BCX66034
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All DBs
Position
731288..734740
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AA seq
1150 aa
AA seq
DB search
MPDATPLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLEDEIALVQSNGIAQWLKLALAE
DAEEDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
INQPHFEPLQRFLTNDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAEGRHQLRNGRGE
AKPLPPANCWQAELWRALLLDVGEEGMAQSRAGVHQRFIERINNLDVAPNGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKSGMPVVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSAFRDGRIDLFSDSLPLNMLNQL
QDDILELRPLNETRERWPAVDPHTDQSIRFHIAHSAQREVEILHDQLLARFSADPQLRPR
DVIVMVPDIDSYAPHIRAVFGQLERHDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVEERDLPTLHRWIEGAGIRWGMNAEQRAGLGLPQALEQNS
WRFGLRRMLLGYAVGSASACGGIEPYDEIGGLDAALIGPLVALLDALEIAHQELMQPASP
QQWSVRLQALVSLFFLASNEHDDFLLSQLEELREAWLENCESVGLQDELSLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLTG
SDEDLLEAITQEHPLQPFSARYFHEGDDLFSYANEWQVLHHLTEQVTECEILDPHVQEEP
LSLGQLQDFLRNPVRHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLEAALAD
ADNADQALDAQARRLQNSGLLPMAGFGECLQRELIEPLPDLLQRYQQLLALWPTPLTSAL
PVNLELHDLRLEGWLSGLHQRADGGLLSITTIPNSIGSIKSRKWHRLTRPWVNHLVACAS
GLAMTTALVASDDSLVLAPMEADSAQRILGDLLLAWQSGMRQPLPIAVKTAFAWLGQTEP
VKAEAAARKAYEGDGLTTDGERRESVALARQFADYDALVADETFVDWCNALYRPLLEAPW
RSMSSEEARP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacacccctcagtgctggttttatggtggttcacggcaaccgcctggac
gagttgcgcagcctggtggttagctggatgcggcgttatccgctggctcccctggaggat
gagatcgcgctggtacagagcaacggcattgcacaatggctcaagcttgcactggccgaa
gatgctgaagaagacgacatgggcggctgtggaatcgccgctgccattgatgtgcagttg
cccggtagtttcatgtggcagctctatcgcatggtgcttggtcgcgacgaaattccggcg
aagtccctgctcgataaagccccattgacctggcgtttgatgcgcctgcttccgcaactg
atcaatcaaccgcacttcgagcccttgcagcgcttccttaccaatgacacggatctgcgc
aaacgctatcagctcgctgagcggctggcggatctcttcgaccaataccaagtgtatcga
gctgactggctcgaagactgggcagaaggccgtcatcagttacgcaacggtagaggcgaa
gccaaaccgctgccgccagcgaattgctggcaggcagaattgtggcgtgcgttgttgctg
gatgtcggtgaagaaggcatggcgcagagtcgtgcaggtgtccatcagcggtttatcgaa
cgtatcaacaacctcgacgtagcgcccaatgggttgccctcccgagtgatcgtgttcggg
atttcctctctgccagctcaagccctggaagcgttggccggattagctcgattcagccag
gtgctgctatgcgtgcataatccgtgtcgtcaccattgggcggacatcgtcgccgataaa
gaccttttgcggcatcaatacaaacgacaagcccgcaaaagcggcatgccggttgtgctc
gacccgcaaacccttcatcaacatgcccatccattgctcgccgcatggggcaagcagggg
cgcgactatataaacttgctcgacagctatgatgatccaaatagctatcgctcggcgttt
cgcgacgggcgcatcgacttgttcagcgacagcctgccactgaacatgctcaatcagttg
caggatgacatcctcgagttgcgtccactgaacgaaactcgcgaacgttggccagccgta
gatccgcatacagatcagtcgatccgttttcacatcgctcacagtgcacaacgtgaagta
gagatccttcacgatcagttgctcgcgcgcttcagcgccgatccacaattgcgtcctcgc
gatgtgattgtgatggtcccggatatcgacagctatgcaccgcacattcgtgcggtgttt
ggtcaactcgaacgtcatgatccgcgcttcatccccttcaccctggctgatcaggggcag
cgtggccgtgatccgttactgatcgccgtcgagcatctgctcaagttgcccgacagtcga
ttccctgtcagcgaaatcctcgatctgctcgacgttccggcgttacgcgcccgctttggt
gtagaggagcgcgacctgccgaccctgcaccgctggattgaaggcgcaggcatccgttgg
ggcatgaatgccgaacagcgtgcgggcctcggtttgccacaggcgctggagcaaaacagt
tggcgttttggtctgcgacgcatgttgcttggttatgccgtaggcagtgccagtgcttgt
ggtggaatcgagccatatgacgagatcggtggtctggacgccgcacttatcggcccattg
gttgcgctactggatgcgttggaaattgcccatcaggaactcatgcagccggcatcgcct
cagcagtggagcgtgcgcttgcaggcattggtgtcgctgttcttcctggccagcaacgaa
catgacgacttcttgctgagtcaattggaagaattgcgggaagcctggctcgagaattgt
gagtcggtaggtctacaagacgaactttcgctgaccgtagtccgtgaagcctggcttgcg
ggtctcgatcaggggcgattatcccaacgctttctcgccggtgcggtgaatttctgtacc
ttgatgccgatgcgggcgattcccttcaaactggtgtgcttgctgggaatgaacgatggc
gattacccgcgtgcacagccacccctcgatttcgacctcatgggcagtgactaccgccct
ggcgatcgctcacggcgcgaagatgaccgctacttgttgctggaagcgctgttgtcggca
cgagaccagctatacatcagttgggtcggccgcagcattcgcgataacagcgaacgccct
gcttcggtgttgatcggccagctccgtgaccatctggccagcggttggcgattgaccggg
tccgacgaagacttgcttgaagccattactcaggaacatccgctgcaacctttcagcgct
cgttactttcatgaaggcgatgacctgttcagctacgccaacgagtggcaggtgcttcac
cacttgaccgagcaagtgactgaatgcgagatccttgatcctcatgttcaggaggagcca
ctgagtctcggtcaactccaggacttcctgcgcaacccggtgcggcatttcttcagccag
cggttgaaggtgttcttcgaggccgccgaagtgcctttggcggatgaagagccctttgta
ctcgacgctctgcaacgctatagcctcagcgacagtttgcttgaagcagcactggctgat
gcggacaacgccgaccaggcacttgacgcgcaggcccggcgtctgcaaaacagtggcctg
ttacccatggccggatttggcgaatgccttcagcgcgaactgatcgagccgctgccggat
ctgctgcagcgctatcagcagcttctggctctgtggccaacgccattgaccagcgctctg
ccggtgaatctggagttgcatgacctgcgtcttgaaggttggctcagtggcctgcatcaa
cgtgccgatggtggcttgttgtccatcaccacgatccccaacagcatcggttcgatcaag
tcgcgcaaatggcatcgcctgacgcggccttgggtcaatcatctggtcgcctgcgccagt
ggtctggcgatgaccacggctttggtggccagtgatgacagtctggtgctcgcaccaatg
gaggcggactccgcgcaacggattctgggtgacctgttgctggcctggcaatcgggtatg
cgtcagccattgccgatcgcggtcaagactgccttcgcctggctgggtcaaaccgaaccg
gtcaaagccgaagcggcggctcgcaaggcttatgaaggtgatggattgaccactgatggt
gagcggcgcgaaagcgtggcgctggctcgtcagttcgctgactacgatgccttggttgcc
gacgagacattcgttgactggtgcaacgctctgtaccggccattgcttgaagccccttgg
cgttcgatgtccagtgaggaggcgcgcccatga
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