Pseudomonas izuensis: LAB08_R09010
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Entry
LAB08_R09010 CDS
T08555
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00630
Glyoxylate and dicarboxylate metabolism
piz00680
Methane metabolism
piz01100
Metabolic pathways
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R09010 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LAB08_R09010 (fdhF)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LAB08_R09010 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_Nqo3
Fer2
Fer4_9
Fer4_6
Fer4_15
Fer4_2
Fer4_18
Fer4_16
Fer4_4
Fer4_NDSU1
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
BCX66286
LinkDB
All DBs
Position
complement(1011266..1014142)
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AA seq
958 aa
AA seq
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MITVFDPKTDIDLGTPARESDVQVTLNIDGRSITVPEGTSVMRAAALMGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMTVHTQTPKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGENHLADVKDTSNPYFDYDPSKCIVCNRCVRA
CEETQGTFALTITGRGFESRVAAAGGENFLDSECVSCGACVQACPTATLMEKNVVEMGQP
ERSVITTCAYCGVGCSFRAEMKGNQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
KPMIRKHISDPWQEVSWDEAVTYAASEFRRLQQKYGRDSIGGITSSRCTNEETYLVQKLV
RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVMGANPSDAHPVF
ASQLKRRLREGARLIVIDPRRIDLVDTVHARADYHLALRPGTNVAMLNALAHVIITEGLQ
DQAFIDARCEGNDFARWSEFVSRAENSPEAISPICGVAAADIRAAARLYATGGNAAIYYG
LGVTEHSQGSTSVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNVAVRTEFEQAWNVTLQPDPGLRIPNMFESALAGTFKGLYCQGEDIAQSDPNTQHVTA
ALSAMECVVVQDIFLNETAKFAHVFLPGASFLEKDGTFTNAERRISRVRKVMEPLGGKAD
WEGTVALANALGYRMDYKHPSEIMDEIASLTPTFTNVSYAELDRHGSLQWPCNAAAPDGT
PTMHIEQFVRGKGRFMLTGYVPTEEKVNSRYPLLLTTGRILSQYNVGAQTRRTDNVAWHD
EDRLEIHPTDAESRGINEGDWVGIGSRAGQTVLRARVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEVSRVYHPSEWQKRFQAFTEEQHRLLKERRQTAKAEVRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgtattcgatccgaaaaccgacatcgatcttggcactcctgcccgcgaaagc
gatgtgcaagtcaccctgaacatcgacggccgcagcatcaccgtgcccgaaggcacttcg
gtgatgcgcgccgctgcattgatgggcaccaccattcccaaactctgtgccaccgacagc
ctggaagcctttggctcctgccgcatgtgcctggtggagatcgacggcatgcgcggctac
cccgcgtcctgcaccacgccggtcaccgaaggcatgacggtgcacacccagacgccgaag
ctcgcgaccctgcgtcgcaatgtcatggagttgtacatctccgatcacccgctggattgc
ctgacctgctcggccaacggcaactgcgagctgcaaaccgtggccggtcaggtcggcctg
cgggaagtgcgttatggctatgaaggcgagaaccatctggccgacgtgaaggacacctcc
aacccctacttcgactacgacccgagcaagtgcatcgtctgcaaccgctgcgtgcgcgcc
tgcgaagaaacccagggcacctttgccctgaccattaccgggcgcggttttgaatcccgc
gtggccgctgccggtggcgagaacttcctcgactcggagtgcgtgtcctgcggcgcctgc
gtgcaggcctgccccaccgcgaccttgatggaaaaaaacgtggtcgaaatgggccagccg
gaacgcagcgtgatcaccacctgcgcctattgcggcgtgggctgttcgttccgcgccgag
atgaaaggcaaccagttggtgcgcatggttccggacaagaacggccaagccaaccacggc
cactcctgcgtcaaggggcgctttgcctggggctacgccacccacccggatcgcatcacc
aagccgatgatccgcaaacacatcagcgacccgtggcaagaggtcagctgggacgaagcg
gtgacctacgccgccagcgaattccgtcggctgcagcaaaagtacggtcgcgactccatc
ggtggcatcacctccagtcgctgcaccaacgaagaaacctatctggtgcagaaactggta
cgcgccgcgttcggcaacaacaacgtcgacacctgtgcccgggtctgccattcgccgact
ggttatggcctgaagcaaaccctgggcgaatccgccggcacccagagtttcgactcggtg
atgcaggccgacgtggtgctggtgatgggtgccaaccccagcgatgcccacccggtgttc
gcttcgcagctcaagcgccgcctgcgtgaaggcgcgcggctgatcgtcatcgatccacga
cgcatcgatctggtggacacggtgcacgcccgtgccgactatcacttggccctgcgcccc
ggcaccaacgtggccatgctcaacgcattggcccacgtgatcatcaccgaaggcctgcaa
gaccaggcctttatcgacgcccgttgcgagggcaacgatttcgcccgttggagcgaattc
gtcagccgcgcggaaaactcgccggaagccatcagccctatctgcggtgtggccgctgcc
gacatccgtgccgccgcacgtttgtatgccaccggcggcaacgcagcgatctactacggc
ctgggcgtcaccgaacacagccagggcagcacctcggtgatgggcatcgccaacctcgcc
atggccaccggcaacatcggccgcgaaggcgtgggcgtgaatccgctgcgggggcagaac
aacgttcagggctcctgcgacatgggctccttccctcatgagttgcccggataccggcac
atctccaatgtggcggtgcggaccgagttcgaacaggcgtggaacgtcactctgcaaccc
gacccgggcctgcgcattcccaacatgttcgagtcggcgctggccggcaccttcaagggc
ctgtattgccagggcgaagacatcgcccagagcgatccgaatacccaacacgtcaccgcg
gccctgtcggccatggaatgcgtggtggtgcaggacatcttcctcaacgaaacggcgaag
ttcgcccacgtgttcctgcccggcgcttcgttcctggaaaaggacggcaccttcaccaac
gccgagcggcgtatctcgcgggttcgcaaggtcatggagccgctgggcggcaaggccgac
tgggaaggcaccgtggccctggccaatgcgctgggctatcggatggattacaaacaccca
tcggaaatcatggatgaaatcgccagcctgacgccgaccttcaccaacgtcagttacgcc
gaactggatcgccacggcagcctgcaatggccgtgcaacgccgccgcaccggacggcacg
ccgaccatgcacatcgagcagttcgtgcgcggcaaggggcgcttcatgctcaccggctac
gtgcccacagaggaaaaggtcaacagccgctatccgctgctgctgaccaccgggcgcatc
ctcagccagtacaacgtcggtgcccagacccggcgtaccgacaacgtcgcctggcatgac
gaagaccgcctggaaatccatccaaccgacgccgaaagccgtggcatcaacgaaggcgac
tgggtcggcatcggcagccgcgccggccagaccgtattgcgtgcgcgggtcaccgaacgg
gttgcgccaggcgtggtgtacaccacgttccacttcccggaatcgggggccaacgtgatc
accacggataactccgactgggccaccaactgtccggaatacaaggtcaccgccgtggaa
gtcagtcgtgtctaccacccttcggagtggcaaaaacgcttccaggcgttcacggaagaa
cagcaccgtttgctcaaggaacgccgtcaaactgccaaagcggaggtacgccgatga
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