Pseudomonas izuensis: LAB08_R09410
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Entry
LAB08_R09410 CDS
T08555
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAB08_R09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R09410
Enzymes [BR:
piz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LAB08_R09410
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LAB08_R09410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
BCX66325
UniProt:
A0ABM7RM96
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All DBs
Position
complement(1048544..1049923)
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AA seq
459 aa
AA seq
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MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVQLTLIPT
AVQGREATAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLLRRVESLHRRLVMRMRDRLMRDRLR
LEGISRRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAAQHPGRQL
AMLRQRLDSLAERLPRAMREGLKSRRLQLQSQMQTLHVVSPLATLGRGYSILLDERGNAI
RSAGQTHTGQRLKAKLGEGELQVRVEDNQLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccctttgcaagactcggcctggaccgcgaagtcctgaccgtcagccag
ctcaacggccgcgcgcgggtgttgctcgaagacgtgttcagcaatatctgggtcgaaggc
gaaatctccaacctcgcccgcccggcgtccggccacgtgtatttcaccctcaaggacagc
ggcgcccaagtacgttgcgcactcttccggcagaacgccgctcgggtacgccaggcgttg
aaggacggtctggcagtcaaggtgcgaggcaaagtctccttgttcgagggacgcggcgat
tatcagctgatcctcgacaccgtggagcccgccggcgacggtgcgttgcgcctggccttc
gatgccttgaaggaaaaactcagcgccgaaggcctgttcagtgccgaacgcaaggtgccg
ctgccggcgcatccgcaacgcatcggcatcatcagttcgcccaccggcgcagtgattcgc
gacatcatcagcgtgtttcgccgccgcgcgccgcaggtgcaactgacgctgatccccacc
gccgtgcagggccgcgaggccaccgcgcagattgtccgcgcactgaaactggcggacgcc
cggggcttcgatgccttgatcctggcccgtggcggcggctctctggaagacctctggtgc
ttcaacgaagaagccgtggcccgcgccgtggatgcctgcgtgacaccgattgtcagcgcc
gtcggccatgaaaccgatgtgtcgatcagtgatttcgtggccgatgttcgcgcacccacg
ccttcggcggccgccgaactgctggcgccggactccagcgacttgctgcgtcgggtcgag
agcctgcaccgccggttggtgatgcgcatgcgcgaccgcctgatgcgtgatcggctgcgc
ctggagggtatctcccgccgattgcgtcatcctggcgaacgcctgcgtcagcaagcgcaa
cggctggacgatctggacatgcgtatgcgccgggccttcgagcgcagcctcaatactcgc
cgcgaacggctgatccgtctggaaacccgcctggccgcgcagcatcccggccggcaactg
gcgatgctgcgtcaacggctcgacagcctcgccgaacgtttgccccgcgccatgcgcgag
ggattgaaaagccgtcgcctgcaactgcaaagccagatgcagacactgcatgtggtcagc
cccctggcgaccctcggccgcggctacagcattttgctcgacgagcgcggcaacgcgatc
cgcagcgccgggcaaacccataccggccagcgcctgaaggccaaactgggtgaaggcgaa
ctgcaagtgcgggtcgaagacaatcaactgacacccgtcaccctttctttactggattga
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