Pseudomonas izuensis: LAB08_R09500
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Entry
LAB08_R09500 CDS
T08555
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piz03019
]
LAB08_R09500 (rnc)
03009 Ribosome biogenesis [BR:
piz03009
]
LAB08_R09500 (rnc)
03036 Chromosome and associated proteins [BR:
piz03036
]
LAB08_R09500 (rnc)
Enzymes [BR:
piz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LAB08_R09500 (rnc)
Messenger RNA biogenesis [BR:
piz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAB08_R09500 (rnc)
Ribosome biogenesis [BR:
piz03009
]
Eukaryotic type
90S particles
RNase
LAB08_R09500 (rnc)
Prokaryotic type
rRNA processing factors
LAB08_R09500 (rnc)
Chromosome and associated proteins [BR:
piz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LAB08_R09500 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BCX66334
LinkDB
All DBs
Position
1058906..1059595
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRTFFVECEIILLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtctccttaagccgtctcgagcgtcagctcggctacaccttcaaggatcaggaa
ctgatggtcctggccctgactcaccgcagttttgccgggcgcaacaacgaacgcctggag
ttcctcggtgacgccatcctcaactttgtcgccggcgaggcgctgttcgatcgcttcccg
ttggcgcgtgaaggccagttgtcgcgtttacgcgcacgcctggtgaaaggtgagaccctg
gccgtgctggcccgtggcttcgatctgggcgaatacctgcgcctggggtcgggcgaactg
aaaagcggcggttttcgccgcgaatcgattctggccgatgccctggaagcgttgattggt
gcgatctacctggacgctggcatggaagtggcacgcgagcgcgtactggcctggctggcc
ggcgagttcgaaggcctgacgctggtcgacaccaacaaagatccgaaaacccgtctgcag
gagtttctgcagtcccgtggttgtgagctgccgcgttacgaagtggtggatatccagggt
gaaccgcattgccggacgtttttcgtcgaatgcgagatcatcttactgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga
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