Pseudomonas izuensis: LAB08_R13620
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Entry
LAB08_R13620 CDS
T08555
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00541
Biosynthesis of various nucleotide sugars
piz01100
Metabolic pathways
piz01250
Biosynthesis of nucleotide sugars
Module
piz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LAB08_R13620 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
piz01005
]
LAB08_R13620 (kdsB)
Enzymes [BR:
piz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LAB08_R13620 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
piz01005
]
Lipid A
LAB08_R13620 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
ETF
DUF2064
Motif
Other DBs
NCBI-ProteinID:
BCX66738
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Position
1506953..1507717
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AA seq
254 aa
AA seq
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MTKAFTVVIPARYASTRLPGKPLLLIAGKPMIQHVWEQASKSSAQRVVVATDDARILEAC
IGFGAEVVMTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVANNLAA
HTEARMATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSRDLLPEG
VPYRRHIGIYSYRAGFLHDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVD
TVEDLERVRRLLEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcctttaccgttgtcattcctgcacgctacgcctccacccgtttgccgggc
aaaccgttgctgctgatcgccggcaagccgatgatccagcacgtctgggagcaggcgagc
aaaagcagcgcccagcgcgtagtggttgcgactgacgatgcgcgcatcctcgaggcctgc
atcgggtttggcgctgaagtcgtgatgacccgcgaggatcacaactccggcaccgatcgc
ctggcggaagtcgcggcgaaactgggtctggcgcctgacgccatcgtcgttaacgtccag
ggcgacgaaccgttgatcccgccgagcgtgatcgatcaagtcgccaacaaccttgcagcc
cacactgaggcgcgcatggccaccctggccgagccgatcgaagacgtcgaaaccctgttc
aatcccaacgtggtcaaggtcgtcagcgacctcaatggcctggcactgacgttcagtcgc
gctacattgccatgggcacgggatgcctttgcccagagtcgtgacctgctgccggagggc
gtgccgtaccgtcgccacatcggtatctattcctaccgcgccggtttcctgcatgacttc
gtcagctggggcccgtgctggttggaaaacactgaatgcctggagcagctacgggctctc
tggcacggcgtacggattcatgtcgccgatgcgctgatcgcgccgccggccggtgtcgat
accgttgaagaccttgagcgcgttcgtcgcctgctggaggcctga
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