Pseudomonas izuensis: LAB08_R15020
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Entry
LAB08_R15020 CDS
T08555
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piz03032
]
LAB08_R15020 (ihfB)
03036 Chromosome and associated proteins [BR:
piz03036
]
LAB08_R15020 (ihfB)
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R15020 (ihfB)
DNA replication proteins [BR:
piz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LAB08_R15020 (ihfB)
Chromosome and associated proteins [BR:
piz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LAB08_R15020 (ihfB)
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LAB08_R15020 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BCX66878
LinkDB
All DBs
Position
1655473..1655769
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctactctcatcaaag
gatgtagagctggccatcaagaccatgcttgagcaaatgtcccagtgcctggctacgggt
gatcgcatcgagatccgtgggtttggcagcttctccctgcactaccgcgcgccgcgggta
ggtcgcaacccgaaaaccggtcagtccgtcagtctcgacggcaagttcgtcccacatttc
aagccaggcaaagaattgcgtgatcgtgtgaacgaggacgaggaggaagggctttga
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