Pseudomonas izuensis: LAB08_R15270
Help
Entry
LAB08_R15270 CDS
T08555
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00521
Streptomycin biosynthesis
piz00523
Polyketide sugar unit biosynthesis
piz00541
Biosynthesis of various nucleotide sugars
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01250
Biosynthesis of nucleotide sugars
Module
piz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LAB08_R15270 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LAB08_R15270 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LAB08_R15270 (rfbC)
Enzymes [BR:
piz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LAB08_R15270 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BCX66903
LinkDB
All DBs
Position
complement(1681478..1682167)
Genome browser
AA seq
229 aa
AA seq
DB search
MAGHKESVKSEFTEGLRLGFEGFSTSALVPVSTLRKNVGHRAYCWRNTMNVITTDLPGVL
IIEPKVYGDERGFFYESFNAKAFEDATGLTTQFVQDNHSRSQKGVLRGLHYQLENTQGKL
VRVTAGEVLDVAVDIRRSSPHFGKWVAVRLSAENRRQLWVPEGFAHGFVVLSEFAEFLYK
TTNYYTPSAERSIRWNDPDLAIDWQLDEAPQLSAKDQAGQLFKDAEVFS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggcggggcataaagaaagcgtaaagagtgagtttacggaggggttacgcctgggtttt
gaagggttttctacatcggccctcgtgccggtcagcactttgcgcaagaatgtgggccat
cgtgcttattgctggagaaacaccatgaatgtaatcaccaccgacctgcccggtgttctg
atcatcgagccgaaggtatatggtgatgaacggggctttttttacgagagcttcaacgca
aaggcttttgaggacgccacgggtctaaccactcagttcgttcaggacaaccattcgcgc
tctcaaaaaggcgtgttgcgtggcctgcattaccagctggaaaacacccaaggcaaattg
gttcgcgtgacggcaggtgaagtactcgatgtggcggtggacattcgccgcagctcaccg
catttcggcaaatgggttgctgtacgcctgtccgccgagaatcgtcgtcagctttgggtt
ccggagggtttcgctcacggcttcgtggtgttgagtgaatttgccgaattcctctacaaa
accaccaactactacactccgtcggctgagcgcagcattcgttggaacgatccggacctt
gccatcgactggcaacttgacgaagccccgcaattgtccgcgaaggaccaggccgggcaa
ttgttcaaggacgctgaagtcttttcctga
DBGET
integrated database retrieval system
