Pseudomonas izuensis: LAB08_R15470
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Entry
LAB08_R15470 CDS
T08555
Name
(GenBank) RHS domain-containing protein
Organism
piz
Pseudomonas izuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Scabin-like
DUF6531
RHS
Pertussis_S1
TEN_YD-shell
Enterotoxin_a
NarE
OCRE
Motif
Other DBs
NCBI-ProteinID:
BCX66923
LinkDB
All DBs
Position
complement(1701291..1706162)
Genome browser
AA seq
1623 aa
AA seq
DB search
MFDPDKLLALNNTIGLLVVAAMNPEQPDIEALLGEFRLCLNDYEAWAQSFWTGGTLDVEQ
VFKVGNDVHLSAPKNATAPISSTVAMCPASGPLTLVHMFEAARFVPIGNTPVMLEPLLNE
GQGEPQYGAPIHETIGPGGILEIPDCWRGNRYRITFFPNVTTDHIKALYDSYQGVVGELE
GWLRSEWESEFQTQWAGFSEANFKERYGMLQRADWRGFENSLNGLWDDVKQLYALIADLQ
ANSAKLLEYLTEAELERLLKASTDAIANLLLVLSDEPLMFIYLAAFTSWLKMLPPQYIAE
VVAQIRTELLISFLLVCLTGPLGLKLGMSTKVLGRIKSERARRWLAAAVLRLAELTSRPD
LTAHAGALKPLMVSARNAPLKPAPTVPLRIRAAGSADRLVDNPVAIARNKSEARTRLGRQ
EHRDDVPKQAKNPNGDSAEPAAHTATHGCPLSLVTGEELLSLTDGTLDGLLPFAFTRLYR
TSAVDIDIDCGLGFGWSHALSQRLELDGDTVTWVDPENRRTPFPRPSLARPAIHNSLARA
AIYLGEQADELIVALAGEAPRFQHFIDGRLSAISDAYGNRLTVQRDLSGRIQRLDNGAGR
CLRLRYDRQHLIAVDYQCFDLADEQPPAWRTEQTLVSYRYDGRGRLIEASNAVGESERYD
YDEQHVLLQRQLAGGASFYWEWERAGKAARCIRHWASFAQMDTRYAWDDAGGGRLTHADG
SQERYVHDDQARLVRRIEADGGELLKAYDAQGRLIAEQDALGAVTEYRYDEVGRLVALIP
PEDAPTSYEYRNGFLHARYRGQAKWTYQRNAQGDLTWLIDPDGQSTYHEYDAQGRLVLIR
YPDHSQHLFTWNRLGQLLEETRPDGGRRQYAYDARGRRTTVEDEFGGITRYQWDAVGRLL
QVTLPSGARRTFSYNAYGRITAERDELERVTRYEYADDLHLVSRRINPDGSTLQYRYDHA
QLLLTAIENESGDSYRLDYTPGGLIRQETGFDGRRTAYAYDLKGQLLEKTEFGDDGSQLV
TAYQRDSAGRLLLKTLPDGSKVEYRYDRLGRLVSVDDGQAHPLAFEYDAHDRLITEHQGW
GTLRYGYDACGQLQHLRLPDNNRLQYHRAEGGALTAIDLNGTRLTGHQFACGRERQRQQG
TLLSDYAYDDQGRLQAHAVSQQQRPRYRRDYAYSASGQLLQIDDSRHGPRHYQYDPCDRL
TGVRHARHDEAEHFSHDPAGNLLIHDRPGPWHLKGNRLLRRADRHYTYDAFGNLSRERRG
DRVTEYRYDSQHRLIGITLPDGRHAAYRYDAFGRRISKTVDGHTTSFFWQGDQLVAESSP
SHYRSYLYEPGSFRPLALLDGKGPTKACPFYYQLDHLGTPQELTDYGGEIVWSARYTAYG
KLRQLTHGGGEQLEQPLRFQGQYFDAESGLHYNRHRYYQPDSGRYLTPDPVKLAGGLNAY
RYVPNPTGWVDPLGLSDCPGGDGCKRPAVGERDSSAKTKVDEGEPVQPGQKKENYYLYRG
DDREPWEIFEAGFEPLGDSKDLYLHAVDNRNPPSYFVSTSIKESEAIKFATGYGLVDGYV
YVLKNIKGIDVNKDLGLMSPHKREVEIAFPGGIKNYDIVGATPVNDDGSYKGYSIPNPQR
KKP
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatcctgacaagctgctggccctgaacaacaccatcggcttgctggtggtcgcc
gcgatgaacccggagcaaccggacatcgaagcactgctcggtgaattccgcctctgtctc
aacgactacgaggcctgggcgcaaagcttctggaccggcggcacactggatgtcgagcag
gtgttcaaggtcggcaatgacgtccacctcagtgcgccgaagaacgccaccgcccccatc
agttccaccgtcgccatgtgccccgccagcggaccgctgaccctggtgcatatgttcgaa
gccgcgcgcttcgtgccgatcggcaatacgccagtgatgctcgaacccttgctcaacgaa
ggccagggcgagccccagtatggcgcaccgattcacgaaaccatcggccccggcggcatc
ctcgaaatccccgattgctggcgcggcaatcgttaccgcatcaccttttttcccaacgtc
accactgatcacatcaaagcactttacgactcataccaaggtgtcgtcggtgaactggaa
ggctggttgcgcagcgagtgggagagcgagtttcaaacacagtgggccgggttttccgag
gcaaatttcaaagaacgctacggcatgctgcaacgcgccgactggcggggcttcgagaac
tcactgaacggcttatgggacgacgtaaagcaactctacgccctgatcgccgacctgcag
gccaacagtgcaaaactccttgaatacctgaccgaagccgaactcgagaggctgctgaag
gcatcgaccgacgccattgccaatctgttgctggtgctgagcgacgagccattgatgttc
atttatctggcggctttcaccagttggctgaagatgttgccgccgcagtacatcgccgaa
gtcgtggcacaaattcgtacagagctgctgatcagtttcctgctggtgtgcttgaccggt
ccattagggttgaagctcggcatgagcaccaaagtgctgggcaggatcaagtccgagcgc
gcccgacgctggctggccgcggcggttttgcgactggcagaactcacgagccgccctgat
ctgaccgctcacgcgggcgctctcaagcccttgatggtgagtgcccgaaacgcaccgctg
aagcctgcccccaccgtgccgttgcggatcagagcggcaggttcggcggataggctggta
gacaatccggttgccattgcgcggaacaagtctgaagccaggacgcgtctggggcgacag
gaacatcgggacgacgttccgaaacaggcgaagaaccccaacggcgacagcgccgaaccc
gccgcccacaccgccacccacggctgtccgctgtcgctggttaccggcgaggaactgctg
agcctcaccgacggcaccctcgacggtctgctgcccttcgccttcacccgcctgtatcgc
accagcgccgtcgacatcgacatcgactgcggcctcggcttcggctggagccatgcgctg
agccagcgcctggagctcgacggcgacaccgtcacctgggtcgatccggaaaaccgccgt
acgccgtttccccgccccagcctggcgcgcccggcgatccacaacagcctggcgcgggcg
gcaatctacctcggcgagcaggcggatgagctgatcgtggcgctggccggcgaggcgccg
cgtttccagcactttatcgacgggcgtctgagcgcgatcagcgacgcctacggcaaccgg
ctgacggtgcagcgcgatttgtctggccgcatccagcgcctcgataacggtgccgggcgt
tgtttgcggctgcgctatgaccgccagcacctgatcgccgtcgactaccagtgctttgac
ctggccgacgagcagccgccggcctggcgcacggagcagaccctggtcagctaccgctac
gacggccgcggccggctgatcgaggcgagcaacgccgtcggtgaaagcgagcgctacgac
tacgacgagcagcacgtcctcctgcaacggcagctggccggcggcgccagtttctactgg
gagtgggagcgcgccggcaaggcagcccgctgcatccgccactgggcctcctttgcgcag
atggacacgcgttatgcctgggacgacgccgggggggggcggctcacccacgccgatggc
agccaggaacgttacgtccacgacgaccaggcgcggctggtgcgtcggatcgaggctgac
ggtggtgagctgcttaaggcttatgacgcccagggccgcctgatcgccgaacaggatgcg
ctgggcgcggtcaccgaataccgctacgacgaagtcggacggctggtcgcgctgattccg
ccggaagacgcgccaacgtcctacgagtaccgcaacggcttcctgcatgcgcgctatcgc
ggtcaagccaagtggacctaccagcgcaatgcccagggcgatctcacctggctgatcgac
cccgacggccagagcacctaccacgaatacgacgcgcaagggcgcctggtgctgatccgc
tatccggaccacagtcagcatctgttcacctggaaccgcctcggccaactgctcgaagaa
acccgccccgacggcggacgccggcagtatgcctacgacgcgcgggggcgacggaccacg
gtcgaggacgagttcggcggcatcacccgctaccagtgggacgccgtcggccgcctgttg
caggtgacgttgccgagcggcgcccgccgcaccttcagctacaacgcctacggccggatt
accgccgagcgcgacgaactggagcgcgtcacccgctacgagtacgccgacgatttgcac
ttggtcagccggcggatcaaccccgacggcagcacgctgcagtaccgctacgaccacgcg
cagctgttgctcaccgcgatcgagaacgagtccggcgacagctatcggctggactacacg
cccggtggcttgatccgccaggaaaccggcttcgacggtcggcgcaccgcctatgcctac
gaccttaagggtcaattgctggagaaaaccgagttcggcgatgacggctcgcagctcgtc
accgcctatcaacgcgacagcgccggacgcctgttgctcaagaccctgcccgacgggagc
aaggtcgagtaccgctatgaccgcctggggcggctggtcagcgtcgacgacggccaggcg
catccgctggcgttcgagtacgacgcccatgaccggctgatcactgaacaccagggctgg
ggcaccctgcgctacggctatgacgcctgcggccagctgcagcacctgcgcctgccggac
aacaaccgcttgcagtaccaccgcgccgaaggcggcgcgctgaccgccatcgacctcaac
ggcacgcgcctgaccggccaccagttcgcgtgcggccgcgaacgccagcgccagcaaggg
accttgttgagcgactacgcctacgacgatcagggccgcctgcaggcccacgccgtcagc
caacagcaacgcccacggtaccgtcgcgattatgcctacagcgccagcggccagctcctg
cagatcgacgacagccgtcacggcccgcgccactaccagtacgacccgtgcgaccgcctg
accggcgtgcgtcatgcccgtcacgacgaggcggaacacttcagccacgacccggccggc
aacctgctgatccacgaccgccccggcccctggcacctcaagggcaaccgcctgctacgc
cgcgccgatcgccactacacctacgacgccttcggcaacctgagccgcgaacggcggggc
gaccgcgtcaccgagtaccgctacgacagccagcaccgcctgatcggcatcaccctgccg
gacggccgccacgcggcctaccgctacgacgccttcggccggcgcatcagcaagaccgtc
gacggccacaccaccagcttcttctggcaaggcgaccaactcgtcgccgaaagcagcccg
agccactaccgcagctacctctacgaacccggcagcttccgcccgctggccctgctcgat
ggaaaaggcccgacaaaagcctgcccgttctactaccaactcgaccacctcggcaccccg
caggaactcaccgactacggcggcgaaatcgtctggtcggcccgctacacggcctacggc
aaactgcgccaactgacccacggtggcggcgaacaactggagcaaccactgcgcttccag
ggccagtacttcgatgctgagagcgggctgcactacaaccgccatcgttattaccagccg
gatagtggccgttatctgacgccggatcccgtgaagctggcgggtggcttgaatgcctat
cgctatgtgccgaacccgacggggtgggtggatccgttggggttgagtgattgtccgggt
ggggatgggtgtaaaaggccggcggttggggagcgggattcgagcgcgaagactaaggtt
gatgaaggggagcctgtccaaccaggtcaaaaaaaagagaactattatttataccgtgga
gatgatcgagaaccatgggaaatttttgaagctggatttgaacctttgggagatagcaaa
gacctttacctacatgccgtggacaatcgaaaccctccaagttactttgtcagcacatca
atcaaagaaagtgaagcaataaaatttgccactggctacggacttgttgatggatatgtt
tatgtattgaaaaacattaaaggaatagatgtaaacaaggaccttggcctaatgtcccca
cacaaacgggaggttgaaattgcgtttcccggaggaattaaaaattacgacatcgtcggt
gccacaccagtcaacgatgatggtagctacaaagggtattcgatacccaacccacaaagg
aagaaaccatga
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integrated database retrieval system
