Pseudomonas izuensis: LAB08_R17590
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Entry
LAB08_R17590 CDS
T08555
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
piz01002
]
LAB08_R17590
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
LAB08_R17590
Peptidases and inhibitors [BR:
piz01002
]
Cysteine peptidases
Family C82
LAB08_R17590
Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LAB08_R17590
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Big_1
Motif
Other DBs
NCBI-ProteinID:
BCX67135
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Position
1954171..1955877
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AA seq
568 aa
AA seq
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MVFLISGTAFGETSPIVQVSPPVSTVSAAPDDGVGQAIQAVLEPLQSAFPPLLTSRKHQR
TDINRVVLDFYSHRNYRAAWTNGRDVTQLFKSLNETAFDGLNPADYRGTELLQAQLAMQA
SAPTPAQSAAFDIGLTRTYITALLQLRRGKVDPSRLDFHWNFDPVGVDPREDVNSFFVAL
DDHDVAGAFAKAPPQEAVYRSMREALAQLRQVRDAGGWPKVAEGQSLKPGMDGVAVAQLR
ARLVAGGYLEPHKSKRSDYDDKVIAAVKKYQVEQYLGADGVAGATTLAALNVPVEARIDQ
VRVNMERARWLLYKLQGTFVVVDIAGYKVALYRDGQPIWRSRVQVGKPIRSTPVFQSEIT
YVTFNPTWTVPPTILVKDMLPKIQQNPDYLAANRIRVLDRDGNVLDPATVDWYNARGLTL
RQDAGPDNSLGQVAIRFPNDYAIYLHDTPHRELFAKSVRATSSGCIRVENPLQLVELLFN
DPARWNSEGIQKQLANGKTENIRLPVRVPVLLAYWTVDLSKEGRVTFKPDVYGYDTPVLQ
QLNLPSKLPALEIPQAENPLVVTGKGEQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtctttctgatcagcggcactgcttttggtgaaacttcgccgatcgtgcaggtatct
cctccagttagcacggtgtccgcggcgcctgacgatggggttggccaggcgatccaggcg
gtgctggaacctctgcaatcggcgttcccgccactgctcacttctcgcaagcaccagcgg
acggacattaaccgcgtcgtcctggatttctattcccatcgcaactatcgtgccgcctgg
acgaatgggcgcgatgtcacccagttgttcaaaagcctgaacgagaccgcattcgatggc
ttgaaccctgcggattaccggggcactgaactgctccaggcgcaactggcaatgcaggct
agcgcgccaacgccggcgcaatcggcggctttcgatatcgggttgacccgcacctacatc
accgcgctgctgcaattgcggcgcggtaaagtcgatccgtcccggctggattttcactgg
aatttcgacccggtgggggttgatccccgtgaagatgtgaacagtttcttcgtcgccctc
gatgatcacgacgtggcaggcgcgtttgcaaaagctccgccgcaagaggcggtttatcgc
agcatgcgcgaggcgctggcgcagttgcgtcaggttcgggatgcgggcggttggccgaaa
gtcgccgaggggcagtcgctcaagccggggatggacggtgttgcagtcgcccagttacgg
gcccgcctggtggccggggggtatctggagccacataagagcaaacgcagcgattacgac
gataaagtcatcgcggcggtgaagaaatatcaagtcgaacagtacctgggcgcggatggg
gtggcaggggcgacgaccctggcggcgctgaatgtgccggtcgaggctcggatcgatcag
gtccgggtgaacatggagcgggcgcggtggttgctgtacaagcttcagggcacttttgtc
gtcgtcgacattgcaggctacaaagtggcgctgtaccgcgacggtcaaccgatctggcgt
tcccgggtacaggtcggcaagccgattcgcagtacgccggtgtttcagtccgagatcacc
tacgtcaccttcaaccccacctggaccgtgccgccgacgattctggtcaaggatatgctg
cccaagattcaacagaacccggattacctggcggccaaccggatcagagtcctggatcgc
gacggcaacgtgctcgatccggcgactgtcgattggtacaacgctcgcggtctgacactg
cgccaggatgctggtcctgataattcattggggcaggtggccattcgcttccccaacgac
tatgcgatctatttgcacgatacgccccatcgcgagctgttcgccaagtccgtacgtgcc
accagttccggctgcatccgggtggaaaacccgctgcaattggtcgaactgttattcaac
gacccggcacgctggaacagcgagggcattcaaaaacagttggccaatggcaagactgaa
aacatcaggctcccggtcagggtgccggtgctgttggcttactggacggtcgacctgagt
aaagaagggcgggtaacgttcaaaccggacgtttatggttacgacactccggtgctgcaa
cagttgaacttgccttcgaaactgccggccctggaaataccgcaggcagaaaacccactg
gtggtgacagggaaaggcgagcaatag
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