Pseudomonas izuensis: LAB08_R17750
Help
Entry
LAB08_R17750 CDS
T08555
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
piz
Pseudomonas izuensis
Pathway
piz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAB08_R17750 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R17750 (uvrB)
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAB08_R17750 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAB08_R17750 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
BCX67150
UniProt:
A0ABM7RN08
LinkDB
All DBs
Position
1973981..1975996
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLADLQY
TRNDMEFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAVEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGREAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESISPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEIRPALTQVDDLLSEISKRVAVEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYEAELRSPGEVAKRIKALEEKMYQLARDLEFEAAAQMRDE
ITKLRERLITV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttcagctcgtcacccgcttcgagcctgccggcgatcagccggaagctatt
cgcctgatggtcgagggcatcgaagccgggctggcgcaccagacgctgctcggtgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcgcaagtgcagcgcccgacactg
gtgctggcgccgaacaagaccctggccgcgcaattgtatggcgagttcaagtcgttcttt
ccgaacaacgcggtggagtatttcgtttcctattacgactactaccagcccgaagcctac
gttccgtcttccgacaccttcattgagaaagatgcctcgatcaacgaccacatcgagcag
atgcgcctgtccgcgaccaaggcgctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggtctgggcagtccggaaacctatttgaagatggttttgcacgtg
gatcgcggcgacaagctcgatcagcgtgagttgctgcggcgtctggccgacctgcagtac
acccgcaacgacatggagttcgcccgagcgaccttccgcgtgcgcggcgatgtgatcgac
atccatccggcagaatccgatttcgaagcgatccgcatcgagctgtttgacgatgaagtg
gaaagtctgtcggcgttcgatccactgaccggcgaagtcatccgcaagctgccgcgtttc
accttctaccccaagagccactacgtgacgccgcgggaaaccctgatgggcgccgtcgaa
ggaatcaaggtcgaattgcaggaacgcctggaatacctgcgttccaacaacaaactggtg
gaagcccagcgtctggagcaacgcacccgtttcgacctggagatgatcctcgaactgggc
tattgcaacggtatcgaaaactactcgcgctacctgtccgggcgcgaagccggggcgccg
ccaccgaccctgtacgactacctgccggccgacgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgccatgtacaaaggtgaccgctcgcgtaaagaaaccctg
gtggaatacggtttccgcctgccttcagcgctggataaccggccgatgcgtttcgacgaa
tgggaaagtatcagcccgcagacgatcttcgtctcggcgacaccgggcaactatgaagcc
gagcacgccgggcgcgtggttgagcaggtggtgcggccgaccggcctggtggacccgcaa
gtggaaatccgcccggcactgacccaggtcgacgatttgttgtcggaaatcagcaagcgc
gtggcggtagaggagcgggtgctggtcaccacgctgaccaagcgcatggccgaagacctg
accgattacctggctgaccacggcgtgcgcgtgcgctacctgcactcggacatcgacacc
gtcgaacgggttgaaatcatccgcgatctgcgtctcggcaccttcgatgtgctggtgggg
atcaacttgctgcgcgaaggcctggacatgccggaagtgtcgttggtggccatcctcgat
gccgacaaggaaggcttcctgcgctccgagcgctcgctgatccagaccatcggccgggcg
gcgcgtaacctcaacggtcgggcgattctgtatgccgatcgcatcaccggctccatggag
cgggcgattggcgaaaccgagcgtcgtcgcgacaagcagatcgccttcaacctcgccaac
ggcatcacgccaaaaggggtgttcaaggacgttgccgacatcatggaaggcgccaccgtg
ccgggttcgcgcagcaagaagcgcaagggcatggccaaggcggccgaggaaaacgccagg
tacgaagccgaactgcgctcgccgggcgaggtcgccaagcgcatcaaggcgctggaagag
aagatgtatcagctcgcccgagatctggagttcgaggctgcggcgcagatgcgcgacgaa
attaccaagttgcgggagcggttgattacggtttga
DBGET
integrated database retrieval system
