Pseudomonas izuensis: LAB08_R17980
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Entry
LAB08_R17980 CDS
T08555
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
piz03016
]
LAB08_R17980 (truA)
Enzymes [BR:
piz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LAB08_R17980 (truA)
Transfer RNA biogenesis [BR:
piz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAB08_R17980 (truA)
Prokaryotic type
LAB08_R17980 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BCX67169
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All DBs
Position
1999256..2000110
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AA seq
284 aa
AA seq
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MANIDNPAAEMAAEGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVS
LLCAGRTDAGVHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGTHDFSAFRAGQCQAK
SPIKQLHHLRVTRHGKMIVLDIRANAFLHHMVRNIAGVLMTIGAGERPVEWMKEVLESRI
RRTGGVTAHPFGLYLVQVEYRDEFELPERYIGPHFLTGFSELDG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacatagataacccggccgccgaaatggcagcggaaggctttttccggatcgca
ttgggcgttgaatacaaaggctcgcgttatcgcggctggcagcgccaggcctccggtgtg
ctcaccgtgcaggaaacactcgaaaacgccttgtccaaagtcgccgattcaccggtttcg
ctgctttgtgcagggcgtaccgatgccggcgtgcacgcctgtggacaagtggtgcatttc
gatacccaggtcgagcggtcgatgaaagcctgggtcatgggtgccaacatcaacctgccg
cacgacgtcagcgtcagttgggccaaggtcatgccggcgcattttcatgcgcggttcaag
gctatcgcccggcgctaccgctatgtgatctacaacgatcagatccgcccggcgcatctc
aacgaagaaatcacctggaaccaccgtccactggacgtcgagcgtatggccgaagcggcg
caatatctggtaggcacccatgacttcagcgccttccgcgccggtcagtgccaggccaag
tcgccgatcaagcaattgcatcacctgcgcgtcacccgtcacggcaagatgatcgtgctg
gatatccgcgccaatgccttcctgcaccacatggttcgcaacattgccggggtgctgatg
accatcggcgctggcgagcgcccggtggagtggatgaaggaggtgttggagagccgcatc
cgtcgtaccggcggggtgacggcgcatccgtttggcctgtatctggtgcaggtcgagtac
cgcgacgagttcgaattgcccgagcgatatatcgggccgcacttcctcaccggtttctcc
gaacttgacggctga
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