Pseudomonas izuensis: LAB08_R20330
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Entry
LAB08_R20330 CDS
T08555
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
piz03000
]
LAB08_R20330
Transcription factors [BR:
piz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LAB08_R20330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_23
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BCX67398
LinkDB
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Position
2254118..2255020
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AA seq
300 aa
AA seq
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MTIKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFTRNTRNVALTAE
GESLVPLARRLIADWDNAEDELRQRFTLQRGRVTLAAMPSFAGNLLPPMLKTFRARYPKV
NVTVNDVINEQVLEMVRDRQVELGVAFEPTQSSSLQFTPLYMDRFVAVVPHGSPLVELDQ
IDWQTLLKEPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAV
PALCAGQMRELGAHCITLSDPVVERAVGVLTLPGGELSAAAQALFDVLKEENLGQRVAMS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaagcagatccgcgccttcctggccgtggcccagagcctgagtttcgccgtg
gcctgcgagcgcctgcacctgtcgcaatcggccttgagcctgaccatcaaggcgctggaa
gaaggcctgggtggacggttgttcacccgcaacacccgcaacgtggcgctgaccgccgag
ggcgaatccctggtgcccctggcgcgccgcctgatcgccgactgggacaatgccgaggat
gagctacgccagcgtttcaccctccagcgcggtcgtgtgaccctggcggccatgccatcg
tttgccggcaacctgctgccgccgatgctcaagaccttccgcgcccgctatccgaaagtc
aacgtcacggtcaacgatgtgatcaacgaacaggtgctggaaatggtccgtgaccgccag
gtggaactgggggtggcgtttgagccgacccagagctcctcgttgcagttcaccccgttg
tacatggaccggttcgtggcggtggtgccccatggctcgccactggtcgagctggatcaa
atcgactggcagaccttgctcaaggaaccgttcatcaccttgcaacgaccgtcgacggta
cgggtgatgctggaagagcatttgcaggccagaggcatgaagttaccggtagagtttgaa
agccatcaattggcgaccgtcgggcgcatggtcgccagcggtttgggcgtcagcgccgtg
cccgccttgtgcgccggacaaatgcgcgaactgggcgcgcattgcatcaccttgagcgac
ccggtggtggagcgggctgtcggtgtgctgaccctgcccgggggagagctgtcggcggcg
gctcaggcattgtttgatgtgttgaaagaggaaaacctggggcaacgagttgccatgagc
tga
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