Pseudomonas izuensis: LAB08_R29100
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Entry
LAB08_R29100 CDS
T08555
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
piz
Pseudomonas izuensis
Pathway
piz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LAB08_R29100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R29100
Transporters [BR:
piz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LAB08_R29100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_29
AAA_22
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCX68270
LinkDB
All DBs
Position
complement(3258963..3260822)
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AA seq
619 aa
AA seq
DB search
MLRAFERRLDPFPPDEGPPPPSGLARFLWACTRGARGYILAFALLSASVSIYEAWLFSFL
GQVVDLLSTWQAGGEAAAQESRVLWGMGIIMVTSVGLVALRTMVQHQILAINLPLRLRWD
FHRLMLRQSLSFFSDEFSGRVTTKVMQTALAVRDLLFTLIEIAPGIGVYFIAIIALAGGF
ALKLMLPFVAWVVLFGLAMWYFVPRLGKVGQEQANARSMMTGRISDAYTNITTVKLFSHS
NREAHFARAAMEDFKQTGFRQMRLVSQFEIVNQALVVALIMAAGGYALWLWHQGEVGAGA
VAAITAMALRINGMSHWIMWQMTSLFESIGTVQDGMATLTRGPKVQDAPDAGVLVTSGGA
VTFDKVRFNYNGERQVLDGLSLSIRPGEKIGLVGRSGAGKSTLINLLLRFYDVDSGEIRI
DGQNIAHVTQDSLRGAIGMVTQDTSLLHRSIRDNIAYGRPDATDAQIRSAAANAQADEFI
SQLSDRQGHTGYDTLVGERGIKLSGGQRQRVAIARVMLKNAPILLLDEATSALDSEVEVA
IQESLDEMMQGKTVIAIAHRLSTIAAMDRLIVMDDGRIIEQGTHSELLAKNGIYARLWQH
QSGGFLGEDQGVVEAMDQV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgcgtttgaacgaagactcgacccctttcctcccgacgagggaccaccgcca
cccagcggcctggctcggttcctgtgggcctgtacgcggggcgctcgcggttacattctt
gcttttgcgctgctcagtgccagtgtgtcgatttacgaagcctggctgttttccttcctc
ggccaggtcgtggacctgctctcgacctggcaggcgggcggtgaagcggccgcccaggaa
agtcgcgtgttgtggggcatgggcatcatcatggtgaccagcgtcggtctggtggcgttg
cgcaccatggtgcagcaccagatattggcgattaacttgccgttgcgtctgcgctgggac
ttccatcgcctgatgctgcggcaaagcctttcgtttttttccgatgaattttccggccgg
gtcactaccaaggtgatgcagacggcgctagcggtgcgcgacctgctattcaccctgatc
gagatcgcacccggtatcggggtgtatttcattgcgatcatcgcactggccggcggcttc
gccttgaaactgatgctgcctttcgttgcctgggttgtgttgttcgggctggccatgtgg
tacttcgtgccccgcctggggaaagtcgggcaggaacaggccaatgcgcggtcgatgatg
accggacgtatctcggacgcctacaccaacatcacgacggtgaaactgttctcccactcc
aatcgtgaagcgcacttcgcgcgtgcggcgatggaggacttcaagcaaaccggctttcgc
cagatgcgcctggtcagccagttcgagatcgtgaaccaggcgttggtggtggcgttgatc
atggcagcagggggctatgccctgtggctatggcaccagggtgaggtcggcgcaggtgcc
gtggcggccatcaccgccatggcgctgcgtatcaatggcatgtcgcactggatcatgtgg
caaatgacctcgctgttcgagagcatcggcaccgtgcaggatggcatggcaacgcttacc
cgcggcccaaaggtgcaggatgcgccggacgcgggcgtcctggtgacctccggcggcgcc
gtaaccttcgataaggtgcgcttcaactacaatggcgaacgccaggtgctcgatggcctg
agcctgagcattcgtccgggcgaaaaaatcggcctggttggccgctccggcgccggcaaa
tccacgctgatcaacttgctgctgcgcttttatgacgtcgacagcggggagattcgcatc
gacggccaaaacatcgcacacgtgacgcaagacagcctgcgcggcgccatcggcatggtc
acgcaggatacctccctgctgcaccgctccattcgcgacaacatcgcctacggccgtccc
gatgcgaccgacgcgcaaatccgcagcgccgcggccaatgcccaggccgatgagttcatc
agccaactgagcgaccggcaaggccacaccggctacgacaccctggtgggcgagcgcggt
atcaagctgtcgggcggccagcgccaacgcgtcgcgattgcccgggtgatgctcaagaac
gccccgatcctgctgcttgacgaggccaccagcgcgctggattcggaagtcgaagtggcc
attcaggaaagcctcgatgaaatgatgcagggcaagacggtgatcgccatcgcccatcgt
ttgtccacgattgcggcgatggaccggctcatcgtcatggatgacggacgcatcatcgaa
cagggtacgcactctgaattgctcgcgaagaacggcatctatgcgcggctgtggcagcat
caaagcggcgggttcctgggtgaggaccagggcgtggtcgaggctatggatcaggtgtga
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