Pseudomonas izuensis: LAB08_R29450
Help
Entry
LAB08_R29450 CDS
T08555
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
piz03009
]
LAB08_R29450
Ribosome biogenesis [BR:
piz03009
]
Prokaryotic type
ribosomal protein modification factors
LAB08_R29450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BCX68305
UniProt:
A0ABM7RSF0
LinkDB
All DBs
Position
complement(3297764..3299959)
Genome browser
AA seq
731 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLIPGEAAEASTYIVGKDLPLEQTIANMSGILSRLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGED
IANAPFVHYPDERWFQPGRKDELPAEILDAYCLKIYNRDGELRGSHLFDTNSGNEERGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPAEVLAKYPAILAGIQALEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSSKSDYEFVEWDFSGQGENSNAEEAATLFGILEGMGKEVYMAVYEHIGATACRILVPDY
SEIYPVDDLIWDNTNKALFFREDILNLHRLDEAGLKALVERLVESELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIWLALQQYEEAKEAVEMFLQYNDNTVERGLFYQAVNAVLEME
LDEDLELADYEANFRRMFGNERMDAAIGSVNGSVRFFGLTPTSMKLEGLDRHLRLIDSYK
KLHAARAHVTG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaggtcaattttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtgatcgccgatcaacccatccgctataagggcgatggctcggcaccggggccgttc
gattacttcctggcttcgtcggccttgtgtgcggcttactttgtgaagttgtactgcgaa
acccgcaacattccgaccgataacattcgtctgtcccagaacaacattgtcgatccggaa
aaccgctacaaccagattttcaagattcaggtcgagttgcctgccgatatctccgacaag
gaccgccagggcattttgcgttccatcgaccgttgcacggtgaagaaggtggtgcaagcc
ggtccggagttcgtgatcgaagaggtggaaaacctcgatgccgatgcccaggcgctgttg
ataccgggtgaggcggcagaggcgagcacctatatcgtgggcaaggacctgccgctggag
cagaccatcgccaatatgtcgggcattctctcgcgcctgggcatgaagattgaaatcgcg
tcgtggcgcaatatcgtgcccaatgtctggtcgctgcatatccgcgatgcgcactcgccg
atgtgttttaccaacggcaagggcgcgaccaaggaaagcgcgttggcctcggccctgggc
gagtttatcgaacggctcaattgcaacttcttctacaacgatcagttctggggcgaagac
atcgccaacgcgccgttcgtgcattacccggacgagcgctggttccagcctggccgcaaa
gatgagctgccggcggaaattctcgacgcctactgcctgaagatctacaaccgcgatggc
gagctgcgtggctcgcatttgttcgacaccaactccggcaatgaagagcgcggcatcgtt
tcgctgccgtttgtgcgccagtcggacggcgaagtggtgtatttcccgtccaacctgatc
gaaaacctgtacctcagcaatggcatgagtgccggcaacacgctggccgaagcccaggtg
cagtgcctgtcggaaatcttcgagcgtgcggtgaagcgcgaaatcatcgaaggtgagttt
gcattgccggatgtaccggccgaagtgctggcgaaataccccgcgattctggcgggtatc
caggcgctggaagcgcagggcttcccggtgctggtcaaggatgcgtccctgggcggtgag
ttcccggtgatgtgcgtgaccttgatgaacccgcgcaccggcggtgtattcgcctcgttc
ggcgcgcacccaagccttgaagtggcgctggagcgcagcctcaccgaattgttgcagggt
cgcagttttgaaggcctgaacgatttgccccagccgacctttgaaggtcacgcggtcacc
gagccgaataacttcgtcgagcactttatcgactccagcggtgtggtgtcgtggcgcttc
ttcagctccaaatcggattacgaattcgttgaatgggacttctcgggccagggtgaaaac
tccaatgccgaagaagccgcgaccctgttcggcattctcgaaggcatgggcaaggaagtg
tacatggcggtgtatgaacacatcggcgcaaccgcctgccgcatcctcgtgccggactac
tcggaaatctatccggtggacgacctgatctgggacaacaccaacaaggcactgttcttc
cgcgaagatatcctgaacctgcatcgcctggacgaagccggcctgaaggcgctggtcgag
cgtctggtagaaagtgaactggatgattacaccgacatcaccaccttgatcggcatcgaa
ttcgatgacaacacggcctggggtcaattgaccatccttgagttgaagctgctgatctgg
ctcgccttgcagcaatatgaagaggcgaaagaggcggtggaaatgttcctgcagtacaac
gacaacacggtcgagcgcgggttgttttaccaggcggtgaatgcggtgctggagatggaa
ctggacgaggatctggaactggcggactacgaagccaatttccgccggatgtttggcaac
gaacgcatggacgcggcgatcggctcggtgaacggcagcgtgcgtttcttcggcttgacg
cctacgagcatgaaactggaagggctcgacaggcacctgcgcctgatcgacagctacaaa
aagctgcacgcggcgcgggcccatgtgacgggttga
DBGET
integrated database retrieval system
