Pseudomonas izuensis: LAB08_R30490
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Entry
LAB08_R30490 CDS
T08555
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
piz
Pseudomonas izuensis
Pathway
piz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LAB08_R30490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R30490
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LAB08_R30490
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
KH_GLD-3_2nd
Motif
Other DBs
NCBI-ProteinID:
BCX68407
UniProt:
A0ABM7RV79
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All DBs
Position
3444522..3445382
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AA seq
286 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMEPVGYKRVNKVTGKEVTKEH
IVKGVAYEKGRYVVLSEEEIRSAHPLSTQTIDIFSFVDSEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALARVVLHTRQYLAALMPMESALVLVKLRWPAEVRSLDELALGP
DVTKAELAKGELDMAKRLVQDMSAEWSPDDYRDEFEDKIMALVDKKAHEGKIEDVETDTE
DETRKTADVIDLTELLKRSLGSKGAGKPVSKPKAASKPAPRKKVSK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggcaatctggaaaggcgcgatcagtttcgggttggtgcatatccccgtggca
ctggtctcggcgacttcctcgcaaggggtggacttcgactggctcgatagccgcagcatg
gagccggtgggctacaagcgcgtcaacaaggtcaccggcaaggaagtgaccaaggagcac
atcgtcaagggtgtcgcctacgaaaaaggccgatacgtcgtactcagcgaagaggaaatc
cgctcggcgcatccactgtcgacccagaccatcgatatcttttcctttgtcgacagtgag
cagattccgttgcagaacatcgacacgccttattacctcgcgccggataaacgcggcggc
aaggtttatgcgctcttgcgtgaaaccctctcaaaaaccaacaaagtcgccctggcccgc
gtggtgctgcatacccgtcagtatctcgccgccttgatgcccatggaatcggccctggtg
ctggtgaaactgcgctggccggcggaggtacgcagccttgatgagctggcgctgggaccg
gacgtgaccaaggccgaactggccaagggcgaactggacatggccaagcgcctggtgcag
gacatgagcgccgagtggtcgccggacgattatcgggatgagttcgaagacaagatcatg
gcgctggtcgacaagaaggcccatgaaggcaagatcgaggatgttgaaacggatacggaa
gatgagacccgcaagacggcggatgtgattgatttgaccgagttgctcaagcgcagtctg
gggagcaagggggcgggtaagccagtatccaagcccaaagcagcaagcaaacctgcgcca
aggaagaaagtcagcaagtga
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