Pseudomonas izuensis: LAB08_R31580
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Entry
LAB08_R31580 CDS
T08555
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R31580
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAB08_R31580
Archaeal homologous recombinant proteins
LAB08_R31580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
ABC_tran
nSTAND3
AAA_22
AAA_15
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BCX68516
LinkDB
All DBs
Position
3581955..3585596
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALYGTVPR
LNSVQPSAKAPDIDGDIGTGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRARDKA
GGRLQASRQSLRDIDQDQLLASQKLEFKNRIESVLGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQASGVTPLAPEARAELDERF
NAAQQQLKLQQAQLKQLELQHTWLKDLRQLQDAQQSATEQLQSAQIHWQNLAGERLKLTR
LEQLAPQRHQFARKAEIDALLTPLAAHIAGQTQQQGELAERQTGLEQQLAAARIALNEAL
QQQTDGAPLLRQAFEEQSTLARLAKDTASSAEAKHNAEQACAQGQSAIQTLLDRQAQVAE
HLQRMAVDLEQSTHLAPLSDAWKAYRDRLQQLVLIGNRLNQGQAELASLEQNATRTAAAF
TAQKQQLEVLYKEAGAEPDAVAEQIGILGSLLQDNRKQLRAIEDLSRLWASQQDLDKRSA
ELQQRQHTAQQERDRLTQDGVKAKAELSVAEQTLNVTRELLERQRLARSASVEELRMQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRFDESEQANAQKAVDLLKEKLTDLRAEVGGLIAQ
QKELLQQQELLATQQQALAPSLAAHPLAAPLLDQDEDKRDAWLTQQNNQLNQSIAQDEQR
QTALLTLQQDAARLTQQLRHAETAHQQAAQHLDNQQRELGNDRQRLDEELAAFASLLPDE
TLQALRSEPAATFMQLDRQITERLAQLDQQKEELAEQQQRQQFLEKEQDRQQTRVQQLRA
AEQQFQALAEQQQASQHTLEQLLGEHSSAEHWQQQLEHAVETARGAETTTTQNLQSVLTQ
QVRIAAELKAQQERLQALESEDTELAGKIADWRARHPELDDGGLEDLLRVDDAHFSELRQ
RLQLSEKEIEQAKVLVQERDKRLMDHQGQHNGNLDAEQLDIALTELQHQCGVSEQRCAEL
RAEQVEDQRRQNANQALARQIAEAYAEFQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPQSLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaaaaacctcgcctccctggccggtccctttgatatc
gacttcaccgccgaacccctggccagcgccggtctgttcgccattaccggaccgaccggc
gccggtaaaagcaccctgctcgacgccttgtgcctcgcactgtacggcacggtgccgcgg
ctcaacagtgttcagccatcggccaaggcaccggacatcgacggtgacatcggcaccggg
gatccacgtacgctgttgcgtcgcggcacgggtgaaggctacgcggaagtcgatttcgtc
ggcattgacggccgtcgctatcgtgcccgctgggaagccaaccgcgcacgggacaaagcg
ggcggcaggctgcaagccagtcgtcaaagcttgcgcgacatcgaccaggatcaactgctc
gccagtcaaaagctcgaattcaaaaacaggatcgagtcggtactgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcacaaagcgagttcagcgccttcctcaaggccgac
gataacgaccgcagcgaactgctggaaaaactcaccgacactgcgctctacacccggctg
ggccgtcgcgccttcgacaagaccaaggaagcccgcgaagcccacaaactgctgcaggat
caggccagcggggtcacgccgctggcgcccgaagcccgggcggaactggatgagcgcttc
aatgccgcccagcaacaacttaaattgcagcaggcacagctcaagcaactcgagttgcag
cacacctggctcaaggacttgcgtcagctgcaggacgcacaacaaagcgccaccgaacag
ctgcaatcagcgcaaatccattggcaaaacctggccggcgaacgcctgaagctgacccgc
ctggagcaactggcgccgcaacggcaccagttcgcccgcaaggccgaaatcgatgccctg
ctgaccccgctggcggcgcacattgccgggcaaacgcagcagcagggcgaactcgccgag
cgccagacggggctggagcaacaacttgccgccgccaggatcgccttgaacgaagcgctc
cagcagcaaaccgacggcgcgccgctgttgcgtcaggccttcgaagaacagagcaccctc
gcccgcctggccaaggacactgcttcaagcgctgaagcgaaacacaacgccgaacaggcc
tgtgcccagggccagagcgccattcaaaccttgctcgaccggcaggcccaggtcgccgaa
cacttgcaacgcatggccgtcgatctggagcaaagcacccatctggcaccgttgagcgat
gcctggaaggcctaccgtgatcgcctgcaacagttggtgttgatcggcaatcgactgaat
caggggcaggccgaactggccagcctcgaacagaacgccacccgtaccgccgctgcgttc
actgcgcagaaacagcagctggaagtgttgtacaaggaggccggcgccgaaccggatgcc
gttgcagagcagattggcattctcggcagcctgttgcaggacaaccgcaaacaactgcgc
gccatcgaagacctgagccggttgtgggccagccagcaggatctggacaaacgcagtgcc
gagctgcaacaacgccagcacaccgcacagcaggaacgcgatcgcctgacccaggacggg
gtgaaagccaaggctgaactgagcgtcgccgaacagaccctcaacgtcacccgcgaactg
ctggagcgtcagcgcctggcgcgcagcgcgagcgtcgaggaactgcgcatgcagttgcag
gacgatcagccgtgcccggtctgtggcagccacgagcatccgtatcatcaacccgaagca
ttgctgcaaagcctcggccgctttgatgaaagcgaacaggccaacgcccagaaagccgtc
gacctgctcaaggaaaagctcaccgacctgcgtgccgaggtcggcggcctgatcgcccag
caaaaggaattgctgcaacagcaggagttactggcgacgcagcaacaagccctggcgcca
agcctcgcggcgcatccgttggccgccccgctgctggatcaggacgaggacaagcgcgac
gcctggctcacccaacaaaacaaccagttgaatcaaagcatcgcccaggatgaacaacgg
caaacggccctgctcaccctgcaacaggatgccgcgcgcctgactcagcaattgcgccac
gccgaaaccgcgcaccagcaagcggcccaacacctggacaatcaacagcgcgaactcggc
aacgaccgtcagcgccttgacgaagaactggccgcgttcgccagcctgctgccggacgaa
accctgcaagcactgcgcagcgagccggccgcgaccttcatgcagctcgatcggcagatc
accgagcggctggcgcagctcgatcaacagaaggaagagctggccgaacagcaacagcgc
cagcaattcctggagaaggaacaggatcggcagcagacccgcgtccagcaattgcgcgcc
gccgaacagcagttccaggcgttggccgaacagcaacaggccagtcagcacaccctcgaa
caattgctcggtgagcacagcagcgccgaacattggcagcagcaactggagcacgccgtg
gaaacggcacgcggcgccgaaaccacgacgacccagaaccttcaaagcgtactcacgcag
caggtgcgaatcgccgccgaactcaaggcacagcaggaacgtttgcaggcactggaaagc
gaagacacggaactggccggtaaaatcgccgactggcgtgcccgccatccggagctggac
gatggcggtcttgaagacctgctgcgggtcgatgacgcccatttcagtgagctgcgccag
cgcttgcagctcagcgaaaaagagatcgaacaggccaaggtcctggtgcaggaacgtgac
aagcgcttgatggaccatcaggggcagcacaacggcaaccttgatgccgaacaactcgac
atcgccctcaccgagttgcaacaccagtgcggcgtcagcgagcagcgctgcgccgaactg
cgcgccgaacaggtcgaggaccagcgccgacagaacgccaatcaggccctggcgcggcaa
attgccgaggcttacgccgagtttcaacgctgggcacgcctgaacgcgttgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgatttgctggtgcac
cacgccaacgtgcagttgcgccaactggtgcggcgctatcgcctcaagcgtggcggcagc
atgctcgggttgctggtgatggacaccgagatgggtgacgaactgcgttcggtgcattca
ttgtccggtggcgagactttcctggtgtcgctggccctggccctgggtctggcatcgatg
gcgtcgagcacgctgaaaatcgaatcactgttcattgacgagggcttcggcagcctcgat
ccgcaatccctgcaactggccatggatgccctcgatggcttgcaggctcaggggcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcatgagcggattccggtgcagattcaggtc
cgccgccagggcaacggcctgagcaccctggaggtgaaatga
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integrated database retrieval system