KEGG   Pseudomonas izuensis: LAB08_R31580
Entry
LAB08_R31580      CDS       T08555                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
piz  Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:piz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:piz03400]
    LAB08_R31580
DNA repair and recombination proteins [BR:piz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LAB08_R31580
    Archaeal homologous recombinant proteins
     LAB08_R31580
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_21 AAA_29 ABC_tran nSTAND3 AAA_22 AAA_15 RsgA_GTPase
Other DBs
NCBI-ProteinID: BCX68516
LinkDB
Position
3581955..3585596
AA seq 1213 aa
MKILAIRLKNLASLAGPFDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALYGTVPR
LNSVQPSAKAPDIDGDIGTGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRARDKA
GGRLQASRQSLRDIDQDQLLASQKLEFKNRIESVLGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQASGVTPLAPEARAELDERF
NAAQQQLKLQQAQLKQLELQHTWLKDLRQLQDAQQSATEQLQSAQIHWQNLAGERLKLTR
LEQLAPQRHQFARKAEIDALLTPLAAHIAGQTQQQGELAERQTGLEQQLAAARIALNEAL
QQQTDGAPLLRQAFEEQSTLARLAKDTASSAEAKHNAEQACAQGQSAIQTLLDRQAQVAE
HLQRMAVDLEQSTHLAPLSDAWKAYRDRLQQLVLIGNRLNQGQAELASLEQNATRTAAAF
TAQKQQLEVLYKEAGAEPDAVAEQIGILGSLLQDNRKQLRAIEDLSRLWASQQDLDKRSA
ELQQRQHTAQQERDRLTQDGVKAKAELSVAEQTLNVTRELLERQRLARSASVEELRMQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRFDESEQANAQKAVDLLKEKLTDLRAEVGGLIAQ
QKELLQQQELLATQQQALAPSLAAHPLAAPLLDQDEDKRDAWLTQQNNQLNQSIAQDEQR
QTALLTLQQDAARLTQQLRHAETAHQQAAQHLDNQQRELGNDRQRLDEELAAFASLLPDE
TLQALRSEPAATFMQLDRQITERLAQLDQQKEELAEQQQRQQFLEKEQDRQQTRVQQLRA
AEQQFQALAEQQQASQHTLEQLLGEHSSAEHWQQQLEHAVETARGAETTTTQNLQSVLTQ
QVRIAAELKAQQERLQALESEDTELAGKIADWRARHPELDDGGLEDLLRVDDAHFSELRQ
RLQLSEKEIEQAKVLVQERDKRLMDHQGQHNGNLDAEQLDIALTELQHQCGVSEQRCAEL
RAEQVEDQRRQNANQALARQIAEAYAEFQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPQSLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgaaaatcctcgccatccgcctgaaaaacctcgcctccctggccggtccctttgatatc
gacttcaccgccgaacccctggccagcgccggtctgttcgccattaccggaccgaccggc
gccggtaaaagcaccctgctcgacgccttgtgcctcgcactgtacggcacggtgccgcgg
ctcaacagtgttcagccatcggccaaggcaccggacatcgacggtgacatcggcaccggg
gatccacgtacgctgttgcgtcgcggcacgggtgaaggctacgcggaagtcgatttcgtc
ggcattgacggccgtcgctatcgtgcccgctgggaagccaaccgcgcacgggacaaagcg
ggcggcaggctgcaagccagtcgtcaaagcttgcgcgacatcgaccaggatcaactgctc
gccagtcaaaagctcgaattcaaaaacaggatcgagtcggtactgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcacaaagcgagttcagcgccttcctcaaggccgac
gataacgaccgcagcgaactgctggaaaaactcaccgacactgcgctctacacccggctg
ggccgtcgcgccttcgacaagaccaaggaagcccgcgaagcccacaaactgctgcaggat
caggccagcggggtcacgccgctggcgcccgaagcccgggcggaactggatgagcgcttc
aatgccgcccagcaacaacttaaattgcagcaggcacagctcaagcaactcgagttgcag
cacacctggctcaaggacttgcgtcagctgcaggacgcacaacaaagcgccaccgaacag
ctgcaatcagcgcaaatccattggcaaaacctggccggcgaacgcctgaagctgacccgc
ctggagcaactggcgccgcaacggcaccagttcgcccgcaaggccgaaatcgatgccctg
ctgaccccgctggcggcgcacattgccgggcaaacgcagcagcagggcgaactcgccgag
cgccagacggggctggagcaacaacttgccgccgccaggatcgccttgaacgaagcgctc
cagcagcaaaccgacggcgcgccgctgttgcgtcaggccttcgaagaacagagcaccctc
gcccgcctggccaaggacactgcttcaagcgctgaagcgaaacacaacgccgaacaggcc
tgtgcccagggccagagcgccattcaaaccttgctcgaccggcaggcccaggtcgccgaa
cacttgcaacgcatggccgtcgatctggagcaaagcacccatctggcaccgttgagcgat
gcctggaaggcctaccgtgatcgcctgcaacagttggtgttgatcggcaatcgactgaat
caggggcaggccgaactggccagcctcgaacagaacgccacccgtaccgccgctgcgttc
actgcgcagaaacagcagctggaagtgttgtacaaggaggccggcgccgaaccggatgcc
gttgcagagcagattggcattctcggcagcctgttgcaggacaaccgcaaacaactgcgc
gccatcgaagacctgagccggttgtgggccagccagcaggatctggacaaacgcagtgcc
gagctgcaacaacgccagcacaccgcacagcaggaacgcgatcgcctgacccaggacggg
gtgaaagccaaggctgaactgagcgtcgccgaacagaccctcaacgtcacccgcgaactg
ctggagcgtcagcgcctggcgcgcagcgcgagcgtcgaggaactgcgcatgcagttgcag
gacgatcagccgtgcccggtctgtggcagccacgagcatccgtatcatcaacccgaagca
ttgctgcaaagcctcggccgctttgatgaaagcgaacaggccaacgcccagaaagccgtc
gacctgctcaaggaaaagctcaccgacctgcgtgccgaggtcggcggcctgatcgcccag
caaaaggaattgctgcaacagcaggagttactggcgacgcagcaacaagccctggcgcca
agcctcgcggcgcatccgttggccgccccgctgctggatcaggacgaggacaagcgcgac
gcctggctcacccaacaaaacaaccagttgaatcaaagcatcgcccaggatgaacaacgg
caaacggccctgctcaccctgcaacaggatgccgcgcgcctgactcagcaattgcgccac
gccgaaaccgcgcaccagcaagcggcccaacacctggacaatcaacagcgcgaactcggc
aacgaccgtcagcgccttgacgaagaactggccgcgttcgccagcctgctgccggacgaa
accctgcaagcactgcgcagcgagccggccgcgaccttcatgcagctcgatcggcagatc
accgagcggctggcgcagctcgatcaacagaaggaagagctggccgaacagcaacagcgc
cagcaattcctggagaaggaacaggatcggcagcagacccgcgtccagcaattgcgcgcc
gccgaacagcagttccaggcgttggccgaacagcaacaggccagtcagcacaccctcgaa
caattgctcggtgagcacagcagcgccgaacattggcagcagcaactggagcacgccgtg
gaaacggcacgcggcgccgaaaccacgacgacccagaaccttcaaagcgtactcacgcag
caggtgcgaatcgccgccgaactcaaggcacagcaggaacgtttgcaggcactggaaagc
gaagacacggaactggccggtaaaatcgccgactggcgtgcccgccatccggagctggac
gatggcggtcttgaagacctgctgcgggtcgatgacgcccatttcagtgagctgcgccag
cgcttgcagctcagcgaaaaagagatcgaacaggccaaggtcctggtgcaggaacgtgac
aagcgcttgatggaccatcaggggcagcacaacggcaaccttgatgccgaacaactcgac
atcgccctcaccgagttgcaacaccagtgcggcgtcagcgagcagcgctgcgccgaactg
cgcgccgaacaggtcgaggaccagcgccgacagaacgccaatcaggccctggcgcggcaa
attgccgaggcttacgccgagtttcaacgctgggcacgcctgaacgcgttgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgatttgctggtgcac
cacgccaacgtgcagttgcgccaactggtgcggcgctatcgcctcaagcgtggcggcagc
atgctcgggttgctggtgatggacaccgagatgggtgacgaactgcgttcggtgcattca
ttgtccggtggcgagactttcctggtgtcgctggccctggccctgggtctggcatcgatg
gcgtcgagcacgctgaaaatcgaatcactgttcattgacgagggcttcggcagcctcgat
ccgcaatccctgcaactggccatggatgccctcgatggcttgcaggctcaggggcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcatgagcggattccggtgcagattcaggtc
cgccgccagggcaacggcctgagcaccctggaggtgaaatga

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