Pseudomonas izuensis: LAB08_R32670
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Entry
LAB08_R32670 CDS
T08555
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00010
Glycolysis / Gluconeogenesis
piz00020
Citrate cycle (TCA cycle)
piz00260
Glycine, serine and threonine metabolism
piz00280
Valine, leucine and isoleucine degradation
piz00310
Lysine degradation
piz00380
Tryptophan metabolism
piz00620
Pyruvate metabolism
piz00630
Glyoxylate and dicarboxylate metabolism
piz00640
Propanoate metabolism
piz00670
One carbon pool by folate
piz00785
Lipoic acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01210
2-Oxocarboxylic acid metabolism
piz01240
Biosynthesis of cofactors
Module
piz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
piz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
piz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
piz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
piz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LAB08_R32670 (lpdA)
00020 Citrate cycle (TCA cycle)
LAB08_R32670 (lpdA)
00620 Pyruvate metabolism
LAB08_R32670 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R32670 (lpdA)
00640 Propanoate metabolism
LAB08_R32670 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAB08_R32670 (lpdA)
00280 Valine, leucine and isoleucine degradation
LAB08_R32670 (lpdA)
00310 Lysine degradation
LAB08_R32670 (lpdA)
00380 Tryptophan metabolism
LAB08_R32670 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAB08_R32670 (lpdA)
00670 One carbon pool by folate
LAB08_R32670 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
piz04147
]
LAB08_R32670 (lpdA)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LAB08_R32670 (lpdA)
Exosome [BR:
piz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LAB08_R32670 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
DAO
NAD_binding_8
GIDA
FAD_oxidored
FAD_binding_3
FAD_binding_2
UDPG_MGDP_dh_N
Tsr0524-like
Motif
Other DBs
NCBI-ProteinID:
BCX68625
LinkDB
All DBs
Position
3701528..3702910
Genome browser
AA seq
460 aa
AA seq
DB search
MQTLHTTLLIIGGGPGGYVTAIRAGQLGISTILVEGESLGGTCLNIGCIPSKALIHVAEQ
FHQTQRHSQQSTLGINVSAPTLDIGKSVEWKDGIVDRLTTGVAALLKKNKVQVIQGWAKV
VDGKTVDVGDTRIICEHLVLATGSKSVSLPILPMGGPIISSTEALAPKSVPKRLIVVGGG
YIGLELGIAYRKLGVDVSVVEAQERILPAYDAELTLPVHEELKKLGVRLYLNHSVQGFDS
NTNTLQISTPDDRTLNLETDQVLVAVGRKPNTQGWNLEALNLDMNGSSIKIDNRCQTSMR
NVYAIGDLSGEPMLAHRAMAQGEMVAELISGKSREFNPTAIAAVCFTDPELVVVGQTPDE
ANAAGLDCIVSSFPFAANGRAMTLESKSGFVRVVARRDNHVIVGWQAVGVGVSELSTAFA
QSLEMGARLEDIGGTIHAHPTLGEAVQEAALRALGHALHL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactctgcacaccacgctgctgatcatcggtggcggccctggcggttatgtgacg
gcgatccgtgctggccagttgggtatttcgaccatcctggtggaaggtgaatccctgggt
ggcacctgcctgaacatcggctgcattccgtccaaggccctgattcatgttgccgagcag
ttccatcaaacgcagcgccacagccagcagtcgacactgggcatcaacgtgtcggcaccg
acgctggatatcggcaaaagcgtcgaatggaaggacggcatcgtcgatcgcctgaccacc
ggcgtcgcagcactgctgaaaaagaacaaggttcaggtcattcaaggctgggccaaagtg
gttgacggcaaaaccgtcgacgttggcgacacgcgcattatttgcgaacacctggtgctg
gccacgggttccaaaagcgtgagcctgccaatactgccgatgggtggtccgatcatttcc
tccaccgaagccctggcgccgaagtccgttccgaagcggttgatcgtggtcggtggcggt
tatatcggtctggagcttgggatcgcctatcgcaagctcggtgtagacgtcagcgtggtc
gaggctcaggaacgtatcctgcctgcatatgacgccgaattgaccctgccggtgcatgaa
gaactgaaaaaactcggcgtaagactttacttgaatcatagcgtgcaaggctttgattca
aatacgaataccctgcaaatcagtacacccgatgatcgcacattgaatctggaaaccgat
caggtgctggtcgccgtgggccgtaaaccgaacacccagggctggaacctcgaagcgctg
aacctggacatgaacggttcgtcgatcaagatcgacaaccgctgccagaccagcatgcgc
aacgtgtatgccatcggtgacctgagcggcgaaccgatgctcgcccaccgggccatggcc
cagggcgagatggtcgccgagttgatcagcggtaagtcccgcgaattcaaccccaccgcc
atcgccgccgtgtgtttcaccgacccggaactggtggtggtcggccagaccccggacgag
gccaacgccgccggcctggattgcatcgtttccagcttcccgttcgccgccaatggccgg
gcgatgacgctggagtcgaaaagcggcttcgtgcgcgtggtcgcccgtcgtgacaatcat
gtgattgtcggctggcaggcggtgggcgttggggtctccgagttgtccacggcgttcgcg
caaagcctggaaatgggcgcgcgactggaagacatcggcggcaccatccatgcccatccg
acgctcggtgaggcggtgcaggaagcggcgttgcgggcccttggccacgcactgcatctg
taa
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