KEGG   Pseudomonas izuensis: LAB08_R33250
Entry
LAB08_R33250      CDS       T08555                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
piz  Pseudomonas izuensis
Pathway
piz00330  Arginine and proline metabolism
piz00480  Glutathione metabolism
piz01100  Metabolic pathways
piz01110  Biosynthesis of secondary metabolites
piz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:piz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    LAB08_R33250 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    LAB08_R33250 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    LAB08_R33250 (speF)
Enzymes [BR:piz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     LAB08_R33250 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: BCX68683
LinkDB
Position
3765019..3767196
AA seq 725 aa
MKALKIAASDTVLDCFLTTREVIPITRTDYTDVAAAVFDVNDVMGGALADLQRTGFNIPI
FLVAAHGTRARDVYKHLEDVLLQVTGIFDPSSKNAQYHGNQLETAAKAYEDSLLPPFFDT
LKRYTESANATFACPGHQGGQFFRKHPAGRQFFDFLGENVFRADMCNADVKLGDLLIHEG
PALRAQMHAAKVFNADKTYFVLNGTSAANKVVTNALLTPGDLVLFDRNNHKSNHQGALIQ
AGATPVYLETARNPYGFIGGIDAHCFEEAYLRELVSEVAPEKTNLPRPFRLAIIQLGTYD
GTVYNARQVVDRIGKLCDYILFDSAWVGYEQFIPMMRDCSPMLLDLDENDPGIFVTQSVH
KQQAGFSQASQIHKKDRHIKGQARYCNHHRLNNAFMAQASTSPFYAIFASLDVNARIHSG
RSGLRLWEDCVKFGIDARKLILEACTMIRPFVPDTIEGRAWEDYPTEEIAADVRFFEFHP
KDRWHAFAGYAEKQYFIDPCKLLFTTPGIDPVDGSYTDFGIHAGILANFLRENGIVPEKC
DLNSILFLLTPAEDWAKMTHLASQIARFERFVSDDAPMSRVLPAIYAQHQERYRNYTIRQ
LCQEMHDLYRKHNVQQLQKAMFRKEHFPKKAMDPQAAQIEYIRGNVELVALADADGRIAA
EGALPYPPGVLCVVPGEIWGGAVLKYFLALEEGINALPGFTPELQGVYLKEDGGRIRAYG
YVIKA
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgaaagcattgaagattgccgcgagcgacaccgtactcgactgtttcctgacgacccgc
gaagtcatccccatcacacggaccgactacaccgacgtcgccgccgccgtgtttgacgtc
aatgatgtcatgggcggtgccctggcagacctgcaacgcaccggtttcaatattccgatt
tttctggtcgccgcccacggcacccgcgcccgcgacgtgtacaagcatctggaagacgta
ctgttgcaggtaaccggaattttcgatccctccagcaaaaacgcccaataccatggcaat
caactggaaacggcggccaaagcctatgaagacagcctgctgccgccgtttttcgacacc
ctcaagcggtacaccgaatcggccaacgccacgttcgcctgccccggtcaccagggcggc
cagtttttccgcaagcacccggcgggccggcagtttttcgacttcctcggtgaaaacgtg
tttcgcgccgacatgtgcaacgccgacgtcaagctcggcgacctgctgatccacgaaggc
ccggccctcagggcacaaatgcacgcggccaaggtgttcaacgccgacaagacctacttc
gtcctcaatggcacctcggctgcgaacaaagtcgtcaccaacgccctgctgacccccggc
gacctggtgctgttcgaccgcaacaaccacaaatccaaccaccagggggcgctgatccag
gccggcgccacgccggtgtacctggagaccgcgcgcaatccctacggctttatcggcggc
atcgacgcccattgctttgaagaagcttacctgcgcgaactcgtcagtgaagtcgcgccg
gaaaaaaccaacctgccacggccgttccgcctggcgatcattcaattgggcacttacgac
ggcaccgtctacaacgcccggcaagtggtcgatcgcatcggcaaactgtgtgactacatc
ctgttcgactcggcgtgggtcggttacgaacagttcatcccgatgatgcgggattgctcg
cccatgttgctcgatttggatgagaacgatccgggcatctttgtcacccagtcggtgcac
aaacagcaggccggcttttcccaggcctcgcagatccacaagaaagaccgccacatcaag
ggccaggcgcgctattgcaatcatcaccgcttgaacaatgcgttcatggcccaggcctcg
accagcccgttctatgcgatttttgcctcactggacgtcaatgcgcgcatacattccggc
cgcagtggcctgcgcctgtgggaagactgcgtgaagttcggcatcgatgcgcgcaagttg
atcctcgaagcctgcaccatgatccgtccgttcgtacccgacaccatcgaaggccgcgcc
tgggaggactacccgaccgaagagattgccgccgatgtgcgcttcttcgagtttcacccc
aaggatcgctggcacgccttcgccggttatgccgaaaaacaatacttcatcgacccctgc
aagttgctgttcaccacgccgggcatcgacccggtggacggcagttacaccgactttggc
attcacgccgggattcttgccaacttcctgcgggaaaacggcatcgtgccggaaaagtgc
gacctgaactcgatcctgttcctgctcaccccggcggaagactgggcgaagatgactcac
ctcgcttcgcagatcgctcgtttcgagcgtttcgtcagtgacgacgcaccgatgagccgg
gtgttgccggccatctacgcgcaacatcaagagcgctatcgcaattacactattcgccaa
ctttgccaggaaatgcacgacctctaccgcaagcacaatgtgcagcaattgcagaaggcg
atgttccgcaaagagcatttcccgaaaaaagccatggacccccaggccgcgcaaatcgag
tacatccgtggcaacgtcgaactggtggcgctggccgacgcagacggccgcatcgccgcc
gaaggtgcactgccctacccacctggcgtgctctgcgtggtgccgggtgaaatctggggc
ggcgcggtgctgaaatacttcctggcgctggaagaaggcatcaatgccttgcccgggttt
accccggaactgcaaggtgtgtatttgaaggaggacggtgggcgtattcgtgcttatggg
tatgtgatcaaggcttga

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