Pseudomonas izuensis: LAB08_R35350
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Entry
LAB08_R35350 CDS
T08555
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00061
Fatty acid biosynthesis
piz00071
Fatty acid degradation
piz01100
Metabolic pathways
piz01212
Fatty acid metabolism
piz02024
Quorum sensing
piz04146
Peroxisome
Module
piz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LAB08_R35350
00071 Fatty acid degradation
LAB08_R35350
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LAB08_R35350
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAB08_R35350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
piz01004
]
LAB08_R35350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
piz04147
]
LAB08_R35350
Enzymes [BR:
piz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LAB08_R35350
Lipid biosynthesis proteins [BR:
piz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LAB08_R35350
Exosome [BR:
piz04147
]
Exosomal proteins
Exosomal proteins of breast milk
LAB08_R35350
Exosomal proteins of breast cancer cells
LAB08_R35350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BCX68893
LinkDB
All DBs
Position
complement(4009039..4010733)
Genome browser
AA seq
564 aa
AA seq
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MNNNKNSTLLHRFLHWELNTPDSIYLTQPLPDGSVQDYSWREVGDQARRMAAHLRTLELP
AKSSIGIFGKNTAHWIIADLAIWMAGHVSVPLYTTANSDTVRYVLEHAEIRLLFVGRLEG
DAAGWNAVCASIPTGLPLIDLPMSGCGKGESWERIIAHTAPLQRVLEPAPEELATIIYTS
GSTGDPKGVMHSFAAMYNAPAVTGCMYDNGRGTSNRDRLLSYLPLAHTAERAVVEAVSLY
SGCRVFFNLGLDTFSDDLRRARPTIFLSMPRLWGKFYQGINERIDPASQAAAFADPVEGK
LMKSQILSALGLDQVHTGLSGSAPLPVKVMEWYRELGLELLEGYGMSENFGTSHFSLPGQ
VRVGYVGAAIPGVECRIGNDNEILVKSPAQMLGYYKRPELTAQSYTADGLFCTGDRGELD
EQGRLRITGRVKELFKTAKGKYVAPVPIEAKLGNHPRVEASCVTGVGLAQPLALINVSPD
TRAALATAEGRDQVGTELEVFLAEVNAQFESHEQLGCLVVVAEPWTVANALLTPTLKIRR
SLIEERYQGQIEAWDASRSKVVFE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacaagaattcaaccctgttgcatcgcttccttcactgggagctcaacaca
cctgattcaatctacctgacccaacccctgcccgatggcagcgtgcaagactacagctgg
cgtgaagtgggcgaccaggcgcggcgcatggccgctcacctgcggaccctcgaactgccc
gcgaaatcgtctatcggcatcttcggcaagaacaccgcgcactggatcatcgccgacctg
gcgatctggatggccgggcacgtcagtgtcccgctgtacacgaccgccaacagcgacacg
gtgcgctacgtgttggagcatgccgaaatacggctgctgttcgtcggtcgcctggagggc
gacgcggcgggctggaatgcggtttgcgcttcgattccaaccggcctgccgttgattgac
ttacccatgtccggctgcggcaagggcgagtcctgggagcgaatcatcgcccatactgcg
ccgctgcaaagggtgctcgaaccggcgcccgaagaactcgccaccatcatctacacctcg
ggcagtaccggcgatcccaagggggtgatgcacagcttcgccgccatgtacaacgcaccg
gcggtgaccggctgcatgtatgacaacggccggggcacgagcaatcgtgaccgcttgctg
tcctacttgccgcttgcccataccgccgaacgagcggtggtggaggcggtgtcgctctac
agtggttgccgggtgttcttcaacctggggctggacaccttcagcgacgacctgcgacgt
gcacgtcctacgattttcctgtccatgccgcggttgtggggcaagttctatcagggcatc
aacgaacgtatcgaccctgccagccaggctgccgctttcgccgatccggtggaaggcaag
ctgatgaagtcgcagatcctctcggccctgggactggaccaggtacacacgggcctgtcc
gggtcggcgccgttgccggtcaaggtgatggagtggtatcgcgagctgggtcttgagtta
ctggaaggctatggcatgtcggagaacttcggcacatcgcatttcagcctgccggggcag
gtgcgtgtcggttatgtgggggcggcaataccgggtgtcgaatgccgtatcggcaacgac
aacgaaattctggtgaaaagtccggcgcagatgctgggctattacaagcgacccgagttg
accgcccagagctataccgccgacggcctgttctgtaccggtgaccgtggcgaactggat
gagcagggacggctgcgcatcaccgggcgggtcaaggagctgttcaagacggccaagggc
aagtacgtcgcgccggtgccgatcgaggccaaactgggtaatcatccgcgtgtcgaggcg
tcctgcgtcaccggcgtcggactggcacaaccgctggccttgatcaacgtgtcgcctgat
acccgcgctgccctggccacggccgaggggcgtgaccaggtgggtactgagcttgaagtg
ttcctggcagaggtcaatgcgcagttcgagtcccatgagcaattggggtgcctggtggtt
gtcgccgagccctggactgtcgcgaatgcgctgctgacgccgaccttgaagattcgtcgc
agtctgattgaagagcgttatcaagggcagatcgaggcttgggacgccagtcgcagcaag
gttgttttcgagtag
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integrated database retrieval system
