Pseudomonas izuensis: LAB08_R38930
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Entry
LAB08_R38930 CDS
T08555
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00260
Glycine, serine and threonine metabolism
piz00460
Cyanoamino acid metabolism
piz00630
Glyoxylate and dicarboxylate metabolism
piz00670
One carbon pool by folate
piz00680
Methane metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01230
Biosynthesis of amino acids
piz01240
Biosynthesis of cofactors
piz04981
Folate transport and metabolism
Module
piz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R38930
09102 Energy metabolism
00680 Methane metabolism
LAB08_R38930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAB08_R38930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LAB08_R38930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAB08_R38930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAB08_R38930
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LAB08_R38930
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BCX69251
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Position
4412154..4413410
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AA seq
418 aa
AA seq
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MFSKHDQIKGYDDALLAAMNAEDARQEHHIELIASENYTSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTATGLIDYDEVERLAVEHQPKMIIAGFSAYSK
TLDFPRFREIADKVGAYLFVDMAHVAGLVATGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANAELEKKLNAAVFPGGQGGPLMHVIAAKAVCFKEALEPAFKSYQAQVIRNAQAMAQ
VFVERGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GLRIGTPAITSRGFKEAQSIELAGWICDILDHLGDAEVEARVARQAAAMCSDFPVYRD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccagatcaaaggctacgacgacgcactgctggcggcgatgaac
gccgaagacgctcggcaggaacaccacatcgagttgatcgcctcggaaaactacaccagc
cagcgggtgatggaggcgcaaggcagcggcctgaccaacaagtacgccgagggttatccg
ggcaagcgctattacggtggctgcgaacacgtcgacgtggttgagcaactggccatcgac
cgcgccaaacaactgttcggcgccgattacgccaacgtgcaaccgcactccggcagccag
gccaacgccgcggtttatctggcgttgctgcaagccggtgacaccgtgctggggatgagc
ctggcccacggcggccacctgacccacggtgccaaggtgagtttttccggcaagctgtac
aacgccgtgcagtacggcattgacaccgcgaccggactgatcgactacgacgaagtcgaa
cgcctggcggtggagcatcaaccgaagatgatcattgccgggttctccgcttattcgaag
accctggacttcccgcgttttcgtgagattgctgacaaggtaggcgcgtacctgttcgtg
gacatggcccacgtcgccgggctggtggcgaccggcctgtacccgaatccgatcccgttc
gccgacgtggtcaccaccacgacccacaagaccctgcgtggtccccgtggcgggctgatc
ctggccagggccaatgccgaactggagaaaaagctcaatgccgcggtgtttcccggtggc
cagggtggtcctttgatgcatgtgatcgcggccaaggccgtgtgcttcaaggaagcgctg
gaaccggcattcaagagctatcaggcgcaagtgatccgcaatgcccaggcgatggcgcag
gtctttgtcgaacggggctacgacgtggtgtccggtggcaccgacaaccatctgttcctg
gtcagcctgattcgccagggcctgaccggcaaggacgccgacgccgccctcggccgtgcc
ggcatcactgtgaacaagaacgccgtgcccaatgatccgcaatcgccgttcgtgacttcc
ggcctgcgcatcggtacaccggcaatcaccagtcgcggtttcaaggaagcccagagtatc
gagctggcaggctggatctgcgacatcctcgatcacctgggcgatgccgaagtcgaagcg
cgagtcgcccgccaggccgcggccatgtgcagcgatttcccggtctatcgcgactga
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