Pseudomonas izuensis: LAB08_R40220
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Entry
LAB08_R40220 CDS
T08555
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
piz
Pseudomonas izuensis
Module
piz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R40220
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R40220
Transporters [BR:
piz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LAB08_R40220
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LAB08_R40220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
BCX69380
LinkDB
All DBs
Position
4556854..4559964
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AA seq
1036 aa
AA seq
DB search
MSNFNLTDWALRHRAIVLFMLLIVAVAGAFSFTRLGQLEDPNFSVPSMTAMVIWPGATAQ
QLQDQVLNRMEKKFEQIDNFEKVVTYARQGYAGMTLTVRGGTSKADQREAWYQARKKLND
LSLEMPDGVIGPILNDEYGDVYGLMYAVKGDGIGHAELSDAAEDIKRQMLKVPMVKKIDL
IGKQAKRVYVEFSHERLAALGITPLAIAESLKSQNAMLPAGQIDTHGDRVMVRVSGQFAS
EEAIRNVPISAGGRLIKLGDVATVTRGFEDPPTYTVRHNGQPVLMLGITMTSDGNIVDLG
KAMDTAVAKIQSELAHGVELELVADQPTTVRDAILDFGRALVEALVIVIAVSLASLGWRA
GLVVAATVPLVLGGVALVMLAMGWNLERISLGSLIIALGLLVDDAIIAIEMMVAKMETGM
DRVKAAAFSYQSTAMPRLTGALITVVGFLPIGLSKSTTGEYAGGIFWIVGAAVLFSWICS
GIFTPYLAVKMLPNDLGKHQHADPHDTKFYRSLRRLIDAAIERRWVVIGATVGALVLALA
CIKLVPQQFFPNSSRPELVIDLRVKEGSSFAATTEQVKHMEAVLAKDEDVRFYTAYTGAG
APRFYLSLNPELPNPGFAQFVVMTKDLDARERVRARLVDSANQQFPQAWIRVTRLELGPP
VGYPVQFRVVGPDTQVVRKIARDVEKVVASNQKVRDLQLDWNDPVRTLKVELDQDKASAL
GLTPADVSLATQTVMNGATLSQLREREDLIDIVARAVPEERLNLDTLKNINLYTRQGTVV
PLSQVAQVRAELEEPVLWRRNRDMAITVRADVKDGEQGVSVTQEILPLLKDIEAKLPTGY
RIDVGGAVEESDKANKALVAVAPLMLVTILLLLMLQLQNFSRMWMVMLTAPLGLIGVVPA
LLVFQSPLGFVAILGIIALGGMIMRNAVILIDQIQIEIAEGRDPWNAVLDAAIHRARPVM
LTALATVLAMIPLTRSVFWGPMAIAIMGGLTVATLLTIFFVPALYAAWFKVRRGKSTDTG
QVIADSSLCTSPAAPR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacttcaatctcaccgactgggcattgcgccaccgcgccattgtcctgttcatg
ctgctcatcgttgcagtggccggtgccttcagcttcacccggcttggccaactggaagac
ccgaacttttccgtgccgtccatgaccgctatggtcatctggccgggcgccactgcccaa
cagttgcaggaccaggtcctcaaccgcatggagaaaaaattcgagcagatcgacaacttc
gagaaggtggttacttacgcgcggcaaggctatgccggcatgacgctcaccgtacgcggc
ggcacctccaaggctgaccagcgcgaggcttggtaccaggcgcgcaagaaactcaacgat
ctgagcctggagatgcctgacggcgtgatcggcccgatcctgaacgacgagtacggcgac
gtgtatggcttgatgtatgcggtcaagggcgacggcatcggccacgctgagttgtcagac
gcggccgaagacatcaagcgccagatgctgaaggtgccgatggtcaagaagatcgatctt
atcggcaagcaggccaagcgtgtctacgtcgagttctcgcacgagcgcctggcagcgctg
ggcattacaccgctggccatcgccgaaagcctcaagagccagaacgccatgctgcccgca
ggccagatcgacacccatggcgaccgcgtcatggtgcgcgtgagtggccagttcgccagc
gaagaggccatccgcaacgtgccgatctccgcgggcgggcggctgatcaagctcggcgac
gtcgcgaccgttacccgtggcttcgaggatccaccgacctacacggtacgtcacaacggc
cagcccgtactgatgctcggcatcacgatgaccagcgacggcaacatcgtggaccttggc
aaggcgatggacacggcagtcgccaagatccagtcggaacttgcgcatggtgtggaactg
gagctggtggccgatcagcccaccacggtgagggatgcaatcctggactttgggcgcgcg
ctggtcgaagcgctggtcattgtgattgcggtcagtctggccagcctgggctggcgcgca
ggcctggtggtcgcggccacggtaccgctggtgctgggtggcgtggcgctggtgatgctg
gcgatgggctggaacctcgaacgtatctcgctcggctcactgattatcgcgttgggactg
ctggtggatgacgccatcatcgctatcgagatgatggtggcgaagatggaaaccggcatg
gaccgcgtgaaggcggccgccttctcctatcagtccaccgccatgccacggctgaccggc
gcgctgatcacggtcgtaggcttcctgccgatcggcctgtcgaagtccaccaccggcgag
tacgcggggggcattttctggatcgtcggtgccgcggtgctgttctcgtggatctgttct
ggcatcttcacaccgtacctggcggtcaagatgctgcccaacgacttgggcaagcaccag
cacgctgatccgcacgatacgaagttctaccgcagcctgcgccgcctgatcgatgccgcc
attgagcgtcgctgggtggtcatcggtgcgacggtgggcgctttggtgcttgctctggcc
tgtatcaagctggtgccgcagcaatttttccccaacagttcgcgtcctgaactggtcatt
gacctgcgtgtcaaggaaggctcctcgttcgccgcgacgactgagcaggtcaagcacatg
gaggcggtcctggcgaaggacgaggacgtgcgtttctataccgcctacaccggcgccggc
gcaccgcgcttttatctctcgctcaaccccgagctgcctaatccgggttttgcccagttc
gttgtgatgaccaaagatctggatgcgcgcgagcgagtacgtgcgcggctggtggactcg
gctaaccaacaattcccacaagcgtggatacgcgtgacccgactcgagttggggccaccc
gtcggctacccggtgcagttccgcgtggtaggccccgatacccaggtagtgcgcaagatc
gcccgggacgtggagaaggtggtggcgtccaaccaaaaggtgcgcgacctccaactcgac
tggaacgacccggtgcgtacgctgaaggtggagcttgatcaggacaaggcgagtgcgctc
ggcctcacgccggccgatgtgtcgttggcgacccagaccgtgatgaatggcgcaaccctg
tcgcagttgcgtgagcgcgaggacctgatcgacatcgtggcccgtgccgtgccagaggaa
cgcttgaacctcgacacactgaaaaacatcaacctttacacacgccaaggcacggtggtg
cccctgtcgcaagtcgcccaggtgcgcgctgaactggaagagccggtactgtggcgccgc
aaccgcgacatggcgatcacggtgcgtgccgacgtgaaggatggtgaacagggtgtatcg
gtgacgcaggaaatcctgccattgctcaaggacatcgaagccaagctgccgaccggatac
cgtatcgatgtaggcggagcggttgaggaaagcgacaaggccaacaaggcgctggtcgcg
gtagccccgttgatgctggtcaccatcctgctgttgctcatgctgcaattgcagaacttt
tcccgcatgtggatggtgatgctcaccgcgccgctgggcctgattggcgtagtgccggcg
ctactggtgttccagtcgccgctgggcttcgtcgcgatcctgggcatcatcgcgctgggt
ggcatgatcatgcgcaacgcggtgattctgatcgatcaaatacaaatcgagatcgccgag
gggcgcgacccgtggaatgctgtactggatgccgccatccaccgagcacgcccggtgatg
ctgacggcactggccaccgtgctcgccatgatcccactcacacgtagtgtgttctgggga
ccgatggcgatcgcgatcatgggtggtctcaccgtggcgacactgctgacgattttcttc
gtcccggcattgtacgcggcatggttcaaggtccgtcgcggcaagtcgactgacaccggg
caggtgatagcagactcgtcgctttgtacaagccccgctgccccaaggtga
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