Pseudomonas izuensis: LAB08_R41380
Help
Entry
LAB08_R41380 CDS
T08555
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00860
Porphyrin metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01240
Biosynthesis of cofactors
Module
piz_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
piz_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LAB08_R41380 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
piz04147
]
LAB08_R41380 (hemB)
Enzymes [BR:
piz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
LAB08_R41380 (hemB)
Exosome [BR:
piz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LAB08_R41380 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BCX69491
LinkDB
All DBs
Position
complement(4695921..4696895)
Genome browser
AA seq
324 aa
AA seq
DB search
MSSQFPEARPRRLRRNASLRSLFQETEFSLNDLVLPIFVEEEIDDFVPIKSMPGVMRIPE
SKLAGEIERYARAGIKSVMTFGVSHHLDSNGSDTWREDGLVSRMSRIAKDAVPEMIVMSD
TCFCEYTDHGHCGVLHNHEVDNDQTLINLGKQAVAAARAGADVIAPSAAMDGQVRAIRRA
LDEAGFTQTAIMAYSTKFASALYGPFREAGGSALKGDRKSYQMNPMNRREAVRESLLDEQ
EGADALMVKPAGAYLDIIRDIREASRLPLSAYQVSGEYAMIKFAAQAGAIDEERVVRESL
GAIKRAGADLIFTYFAMDLALAGI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccagttccccgaagcacgtccacgccgtctgcgccgcaatgcgagcctgcgc
agcctgttccaggaaaccgagttcagcctgaacgacctggtcctgccgatcttcgtcgaa
gaagagatcgacgacttcgtgccgatcaaaagcatgcccggggtgatgcgcattccggaa
tcgaaactggccggtgaaatcgagcgttatgcccgggccgggatcaagtcggtgatgacc
ttcggcgtgtcccatcacctggacagcaatggcagcgacacctggcgcgaagacggtctg
gtgtcgcgcatgtcgcgcattgccaaggacgcggtgccggaaatgatcgtcatgtccgac
acctgtttttgtgaatacaccgatcacggccattgcggcgtgctgcacaaccatgaagtg
gataacgaccagaccctgatcaaccttggcaagcaagccgtagcggcggcccgcgccggt
gccgacgtgattgcgccgtcggcggcgatggacggccaggtccgggccatccgccgggca
ctggatgaggccggtttcacccagacggcgatcatggcctattcgaccaaattcgcttcg
gcgctctatggcccgttccgcgaagccgggggcagtgcgctcaagggcgaccgcaaaagc
tatcaaatgaacccgatgaaccgccgcgaggcggtgcgcgaatcgttgttggacgaacag
gaaggcgccgatgcgctgatggtcaagccggcaggtgcctacctggacatcatccgcgac
atccgcgaagcctcgcgcctgcccctgtcggcgtatcaggtcagcggcgagtacgcgatg
atcaagttcgccgcgcaggcgggggccatcgacgaagagcgcgtggtgcgcgaaagcctg
ggggcgatcaagcgggcgggggcggatctgatctttacctactttgcgatggacctggcc
ctggccgggatctaa
DBGET
integrated database retrieval system
